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ABSTRACT
This project ECG monitoring system deals with a transfer of ECG data from the
patients to the doctor present in his cabin. The idea of our project is firstly taking up an
ECG signal from the patient and reading the data in PC using an arduino (an open-source
electronics prototyping platform based on flexible, easy-to-use hardware and software)
board. Then the signal is applied to noise removal, base wander removal and
amplification circuits in labVIEW (a system design software) software. Now the ECG
signal thus obtained is sent from the patients recording system to doctors using an
Ethernet cable or LAN connection. This enables the monitoring of any number of patients
by doctor at one place.
PAGE NO
CHAPTER 1. INTRODUCTION.....................................................................................1
1.1 Introduction............................................................................................................1
1.1.1 Heartbeat .........................................................................................................2
1.1.2 Heart And Functions ........................................................................................2
CHAPTER 2: SOFTWARE .............................................................................................4
2.1. LabVIEW..............................................................................................................4
CHAPTER 3. PROJECT OVERVIEW ............................................................................6
3.1. Aim ...................................................................................................................6
3.2. Basic idea behind the project .................................................................................6
3.3. Methodology .........................................................................................................6
3.3.1. Simulation ......................................................................................................7
3.3.2. Detrending .................................................................................................... 12
3.3.3. Merging Of Signals ....................................................................................... 16
3.3.4. Square and Square Root Of A Signal ............................................................ 16
3.3.5 Peak Detection .............................................................................................. 20
3.3.6. Array Building .............................................................................................. 25
3.3.7. Matlab Script ................................................................................................ 29
3.3.8. WA Noise ..................................................................................................... 30
3.3.9. Performing Feature Extraction On ECG Signals: ........................................... 38
3.3.10. UDP VI and Functions ................................................................................ 42
3.3.11. Flatten To String Function .......................................................................... 47
3.3.12. Unflatten From String Function .................................................................. 49
CHAPTER 4. RESULTS ............................................................................................... 52
4.1 Results ................................................................................................................. 52
CHAPTER 5. CONCLUSION ..54
5.1 Conclusion....54
5.2 Future Scope.54
ii
iii
PAGENO.
1.1
ECG Signal
1.2
2.1
LabVIEW
3.1
3.2
Simulation
3.3
Detrending
13
3.4
Merging
17
3.5
Square of signal
17
3.6
18
3.7
21
3.8
24
3.9
Peak Detection
26
3.10
Array Building
27
3.11
Matlab Script
30
3.12
WA Noise(DWT Waveform)
31
3.13
35
3.14
UDP Close
44
3.15
UDP Open
44
3.16
UDP Read
46
3.17
UDP Write
47
3.18
48
3.19
50
3.20
51
LIST OF TABLES
iv
PAGENO.
3.1
Simulation Inputs
11
3.2
Simulation Outputs
11
3.3
13
3.4
21
3.5
30
3.6
31
3.7
32
3.8
Wavelet Decomposition
32
3.9
36
3.10
36
3.11
37
3.12
UDP Palettes
43
3.13
48
3.14
51
LIST OF SCREENSHOTS
v
PAGENO.
3.1
12
3.2
Detrending
16
3.3
Peak Detection
23
3.4
Filtering
33
3.5
40
3.6
ECG Signal
41
3.7
Signal Processing
42
3.8
Original ECG, ECG after filtering and ECG after peakvalley detection
43
3.9
53
3.10
Client side
54
vi
4.
Ventricles depolarize.
Ventricles re polarize.
CHAPTER 3
PROJECT OVERVIEW
3.1 Aim
The main aim behind the project is to pick an ECG signal using simulator in
LabVIEW and using UDP protocol sends the information form client to server.
3.3 Methodology
At Server:
Pick up the ECG signal using simulator, simulate the signal, then wavelet analysis
is done using Discrete Wavelet Transform (DWT). DWT is any wavelet transform for
which the wavelets are discretely sampled. As with other wavelet transforms, a key
advantage it has over Fourier transforms is temporal resolution: it captures both
frequency and location information (location in time).
The discrete wavelet transform has a huge number of applications in science,
engineering, and mathematics and computer science. Most notably, it is used for signal
coding, to represent a discrete signal in a more redundant form, often as a preconditioning
for data compression. Practical applications can also be found in signal processing of
accelerations for gait analysis, in digital communications and many others. After wavelet
analysis is done signals are merged, processed, denoised, detrended, R-R interval peak
detection, find heart rate , server-client transfer of information.
Merging of signals
Signal Processing
Filtering of signal
Peak detection (Finding R-R peaks)
Array building
Flatten data to
string
Write to UDP
stop
Fig. 3.1 Flowchart for Server
Specifies basic settings for simulating ECG signals. Contain the following
ECG
Settings options:
simulated
ECG
signals.
You
can
select Simulate
You
can
type to User-Defined,
you
can
use
the Wave
Advanced Specifies advanced settings for simulating ECG signals. Contains the
Settings
following options:
10
error out
Contains error
out functionality.
information. This
output
11
provides standard
error
12
Extension specifies the method to use to pad data at the borders of the input
signal. The extension length is equal to the length of the wavelet filters.
When you select the extension method, make the transition between the
input signal and the padded data as smooth as possible because a smooth
transition generates fewer large detail coefficients and enhances the
efficiency of the signal representation.
0 Zero paddinguses zeros to pad the input data. Watch for abrupt transitions
between the padded zeros and the input data, which causes large artifacts near
the transition.
1 Symmetric (default)uses replications of the input data to pad the data, except
that this vi left-flips the block at the input and right-flips the block at the end.
3 Periodicadds a replication of the input data block before and another
replication after the input data block to pad the data.
Table 3.3 Extension to pad data
that
this
VI
removes
from
thesignal.
The threshold
transform
level
is
floor(log3[sampling
rate/(3*threshold
Wavelet specifies the wavelet type to use for the discrete wavelet analysis.
The default is db03. The options include two types: orthogonal (haar,
daubechies (dbxx), coiflets (coifx), symmlets (symx)) and biorthogonal
(biorthogonal (biorx_x), including fbi (bior4_4 (fbi))), where x indicates the
13
Error in describes error conditions that occur before this node runs. This
input provides standard error in functionality.
Filter banks specifies the analysis filter banks and the synthesis filter
banks for the wavelet you specify. If you specify a value for filter banks, this
vi ignores the settings in the wavelet input. You can use the wavelet design
express vi to design the analysis filters and the corresponding synthesis
filters.
o Analysis filters specifies the coefficients of the low pass analysis
filters and the high pass analysis filters for the wavelet you specify.
Low pass specifies the coefficients of the low pass analysis
filter, which this vi uses to compute the approximation
coefficients
High pass specifies the coefficients of the high pass
analysis filter, which this vi uses to compute the detail
coefficients
o Synthesis filters specifies the coefficients of the low pass synthesis
filters and the high pass synthesis filters for the wavelet you specify.
Low pass specifies the coefficients of the low pass synthesis
filter, which this vi uses to filter the interpolated
approximation coefficients in the wavelet reconstruction.
14
Error out contains error information. This output provides standard error
out functionality.
15
Fig.3.4 Merging
Input signal specifies the signal you want to combine with another signal.
Combined signal returns the combined signals. You can wire the dynamic
data type to a graph or numeric indicator. For example, if you wire
the combined signal to a graph indicator, LabVIEW represents each signal
as an individual plot.
16
you
wire
fixed
point
values
to
numeric
functions
such
as Add, Subtract, Multiply, and Square, the functions usually return values that do not
lose any bits of word length. However, if the operation creates a value that exceeds the
maximum word length that LabVIEW accepts, overflow or rounding conditions can
occur. LabVIEW accepts a maximum word length of 64 bits. Use the Numeric Node
Properties dialog box to configure how LabVIEW handles overflow or rounding of fixedpoint data.
Square root of a signal:
Computes the square root of the input value. If x is negative, the square root
is NaN unless x is complex. If x is a matrix, this function takes the matrix square root
of x. The connector pane displays the default data types for this polymorphic function.
17
arg(x) = arctan2(b,a)
Square Root Details
When you wire matrix data as an input to this function, a VI that includes subVIs
that work with the matrix data type replaces the function. The resulting VI has the same
icon but contains a matrix-specific algorithm. The node remains a VI if you disconnect
the matrix from the input(s). Wire other data types as inputs to restore the original
function. If you wire a data type to a function and that data type causes a basic math
operation to fail, the function returns an empty matrix or NaN.
Fixed-Point Details
If you wire a signed fixed-point value to this function, the function converts the
signed number into a floating-point number and performs the square root operation. By
default, LabVIEW configures the integer word length of the square root to avoid
overflow. However, because the precision of the square root can be infinite, rounding
conditions always occur. Use the Numeric Node Properties dialog box to configure how
LabVIEW handles overflow and rounding of fixed-point data.
Palette
Object
Absolute
Description
Returns the absolute value of the input.
Value
18
Compound
Arithmetic
inputs. To select the operation (Add, Multiply, AND, OR, or XOR), rightclick the function and select Change Mode from the shortcut menu. When
you select this function from the Numeric palette, the default mode is Add.
When you select this function from theBoolean palette, the default mode is
OR.
DBL
Numeric
numeric value to the block diagram. Set this value by clicking inside the
Constant
Decrement
Divide
Increment
Machine
Epsilon
Multiply
Negate
Numeric
Use the numeric constant to pass a numeric value to the block diagram. Set
Constant
this value by clicking inside the constant with the Operating tool and typing
a value.
Random
Number
(0-1)
distribution is uniform.
Reciprocal
Round
Scale
19
Square
Subpalette
Description
Math
& Use the Math & Scientific Constants to create LabVIEW applications.
Scientific
Constants
Table 3.4 Palettes for Arithmetic Operations
Threshold instructs the VI to ignore peaks and valleys that are too small.
The VI ignores peaks if the fitted amplitude is less than threshold. The VI
ignores valleys if the fitted trough is greater than threshold.
Error in describes error conditions that occur before this node runs. This
input provides standard error infunctionality.
Initialize, when TRUE (default), causes the VI to process the first block of
data. The VI requires some internal setup that must be done at the start for
proper operation.
End of data (T), when TRUE (default), causes the VI to process the last
block of data. The VI cleans up internal data after the last block has been
processed.
21
and
at
amplitudes
not
found
in
the
inputarray.
22
Error out contains error information. This output provides standard error
out functionality.
0 Peaks
1 Valleys
Threshold instructs the VI to ignore peaks and valleys that are too small.
The VI ignores peaks if the fitted amplitude is less than threshold. The VI
ignores valleys if the fitted trough is greater than threshold.
23
Error in describes error conditions that occur before this node runs. This
input provides standard error infunctionality.
Initialize, when TRUE (default), causes the VI to process the first block of
data. The VI requires some internal setup that must be done at the start for
proper operation.
End of data (T), when TRUE (default), causes the VI to process the last
block of data. The VI cleans up internal data after the last block has been
processed.
Locations contains the index locations of all peaks or valleys detected in the
current block of data for each waveform.
o Locations contains the index locations of all peaks or valleys
detected in the current block of data. Because the peak detection
algorithm uses a quadratic fit to find the peaks, it actually
interpolates between the data points. Therefore, the indexes are not
integers. In other words, the peaks found are not necessarily actual
points in the input data but may be at fractions of an index and at
amplitudes
not
found
in
the
input
array.
24
Error out contains error information. This output provides standard error
out functionality.
25
Description
Array
Constant
Use this constant to supply a constant array value to the block diagram.
Array Max Returns the maximum and minimum values found in array, along with the
& Min
indexes for each value.
Array Size
Array
Subset
Array
Cluster
Array
Matrix
Decimate
1D Array
Divides the elements of array into the output arrays, placing elements into
the outputs successively.
Delete From Deletes an element or subarray from n-dim array and returns the edited
Array
array in array w/ subset deleted and the deleted element or subarray
indeleted portion.
Index Array Returns the element or subarray of n-dimension array at index.
Initialize
Array
Insert
Array
Into Inserts an element or subarray into n-dim array at the point you specify
inindex.
Interleave
1D Arrays
Interpolate
1D Array
Matrix
Array
Replace
Array
Subset
Reshape
Array
1D Rotates the elements of array the number of places and in the direction
indicated by n.
Search
Array
Sort
Array
Split
Array
1D Divides array at index and returns the two portions with the element of
index at the beginning of second sub array.
28
Transpose
3D Array
29
30
31
Levels specifies
the
number
of
levels
in
the
discrete
wavelet
Wavelet specifies the wavelet type to use for the discrete wavelet analysis.
The default is db03. The options include two types: orthogonal (Haar,
Daubechies (dbxx), Coiflets (coifx), Symmlets (symx)) and biorthogonal
(Biorthogonal (biorx_x), including FBI (bior4_4 (FBI))), where x indicates
32
Error in describes error conditions that occur before this node runs. This
input provides standard error in functionality.
Filter banks specifies the analysis filter banks and the synthesis filter
banks for the wavelet you specify. If you specify a value for filter banks, this
VI ignores the settings in the wavelet input. You can use the Wavelet design
express VI to design the analysis filters and the corresponding synthesis
filters.
o Analysis filters specifies the coefficients of the low pass analysis
filters and the high pass analysis filters for the wavelet you specify.
Low pass specifies the coefficients of the low pass analysis
filter, which this VI uses to compute the approximation
coefficients
High pass specifies the coefficients of the high pass analysis
filter, which this VI uses to compute the detail coefficients
o Synthesis filters specifies the coefficients of the low pass synthesis
filters and the high pass synthesis filters for the wavelet you specify.
Low pass specifies the coefficients of the low pass synthesis
filter, which this VI uses to filter the interpolated
approximation coefficients in the wavelet reconstruction.
High pass specifies the coefficients of the high pass
33
wavelet coefficients The length of user defined thresholds must equal levels.
The first element of user defined thresholds contains the threshold for the
detail coefficients at the largest level, and the last element of user defined
thresholds contains the threshold for the detail coefficients at the first level.
If you specify a value for user defined thresholds, this VI keeps the
approximation
coefficients
unchanged
and
ignores
the
settings
Error out contains error information. This output provides standard error
out functionality.
34
Option for approx coefficient specifies the operation for the approximation
coefficients from the wavelet decomposition. If you specify a value for user
defined thresholds, this vi ignores the settings in option for approx
coefficient.
35
Levels specifies
the
number
of
levels
in
the
discrete
wavelet
Wavelet specifies the wavelet type to use for the discrete wavelet analysis.
The default is db03. The options include two types: orthogonal (haar,
daubechies (dbxx), coiflets (coifx), symmlets (symx)) and biorthogonal
(biorthogonal (biorx_x), including fbi (bior4_4 (fbi))), where x indicates the
order of the wavelet. The higher the order, the smoother the wavelet. The
orthogonal wavelets are not redundant and are suitable for signal or image
denoising and compression. The biorthogonal wavelets usually have the
linear phase property and are suitable for signal or image feature extraction.
If you want to use other types of wavelets, do not wire this input. Instead,
use the wavelet design express vi to design the wavelet you want, bundle
the resulting analysis and synthesis filters, and then wire them to the filter
banks input.
Error in describes error conditions that occur before this node runs. This
input provides standard error in functionality.
Filter banks specifies the analysis filter banks and the synthesis filter
banks for the wavelet you specify. If you specify a value for filter banks,
36
coefficients
The
length
of user
defined
thresholds must
equal levels. The first element of user defined thresholds contains the
threshold for the detail coefficients at the largest level, and the last element
of user defined thresholds contains the threshold for the detail coefficients
at the first level. If you specify a value for user defined thresholds, this vi
keeps the approximation coefficients unchanged and ignores the settings
in thresholding rule, rescaling method, andoption for approx coefficient.
37
Error out contains error information. This output provides standard error
out functionality.
38
39
40
41
Figure 3.8 Original ECG, ECG after filtering and ECG after peak/valley detection
After extracting the features, you can perform heart rate variability (HRV)
analysis on the R-R interval signal to demonstrate the state of the heart and nerve system.
In HRV Analyzer of LabVIEW Biomedical Toolkit, you can directly synchronize the RR
intervals from ECG Feature Extractor.
3.3.10. UDP VI and Functions:
UDP Multicast Opens a UDP multicast socket on the port. You must manually select
Open
the polymorphic instance you want to use.
UDP Open
UDP Read
Reads a datagram from a UDP socket, returning the results in data out.
UDP Write
42
Error in describes error conditions that occur before this node runs. With
the following exception, this input provides standard error in functionality.
This node runs normally even if an error occurred before this node runs.
Connection ID out has the same value as connection ID. Do not wire this
output to other UDP functions.
Error out contains error information. This output provides standard error
out functionality.
UDP open:
opens a UDP socket on the port or service name. Close the socket with the UDP
Close function. Use the UDP Multicast Open VI instead of this function to open
connections capable of reading, writing, or reading and writing data to or from UDP
Multicast sockets. Use the UDP Write function to query the NI Service Locator for the
port number registered with the service name.
Port is the local port with which you want to create a UDP socket.
Service name creates a known reference for the port number. If you
specify a service name, LabVIEW registers the service name and the port
number with the ni service locator.
Error in describes error conditions that occur before this node runs. This
input provides standard error in functionality.
Port returns the port number the function used. If the input port is not zero,
the output port number equals the input port number. Wire 0 to the port
input to dynamically choose an available UDP port the operating system
determines is valid for use. As defined by the internet assigned numbers
authority (iana), valid port numbers are between the range of 49153
through 65535. Well known ports are between the range of 0 through 1033
and registered ports are between the range of 1034 through 49151. Not all
operating systems follow the iana standard; for example, windows returns
dynamic ports between the range of 1034 through 5000.
Error out contains error information. This output provides standard error
out functionality
44
Timeout ms specifies the time, in milliseconds, that the function waits for
bytes. If no bytes have been received within the specified time, the function
completes and returns an error. The default is 35,000 ms. A value of 1
indicates to wait indefinitely.
Error in describes error conditions that occur before this node runs. This
input provides standard error in functionality.
Data out contains the data read from the UDP datagram.
Error out contains error information. This output provides standard error
out functionality.
Port is the port of the UDP socket that sent the datagram.
45
Port or service name can accept a numeric or string input. Port or service
name identifies what port to write to. If you specify a service name,
LabVIEW queries the ni service locator for the port number that the server
registered.
Error in describes error conditions that occur before this node runs. This
input provides standard error infunctionality.
Error out contains error information. This output provides standard error
out functionality.
46
Byte order sets the ending format of the data in the resulting flattened
string. Byte order, or ending form, indicates whether integers are
represented in memory from most significant byte to least significant byte
or vice versa.
Error in describes error conditions that occur before this node runs. This
input provides standard error in functionality.
Data
string is
the flattened
47
data generated
by
the
function. Data
Type string (7.x only) is visible only if the terminal is already wired from
a previous version of LabVIEW or if you right-click the function and
select Convert 7.x Data from the shortcut menu. Type string (7.x only) is
an encoded binary description of data string. Type string (7.x only) is not
the same as the type input in the Unflatten From String function. If type
string (7.x only) cannot represent the data type wired to anything, this
function returns an error.
Error out contains error information. This output provides standard error
out functionality.
string to
the
type
wired
to type. Binary
string should
contain flattened data of the type wired to type. You also can use this function to specify
the byte order, or ending format, of the data in the binary string.
49
Byte order indicates the ending format of the data in the incoming
flattened string. Byte order, or ending form, indicates whether integers are
represented in memory from most-significant byte to least-significant byte
or vice versa.
Error in describes error conditions that occur before this node runs. This
input provides standard error in functionality.
Rest of the binary string contains any leftover bytes that this function did
not convert. This function does not convert all the bytes if the size of binary
string is not a multiple of the size of type.
Value returns binary string as unflattened data of the same data type and
structure as type.
Error out contains error information. This output provides standard error
out functionality.
50
Concatenate data
received, and display
it in the string
indicator
Concatenate data
received, and display
it in the string
stop
Fig.3.20 Flowchart for Client
51
52
53
Using the same ECG aquistion we can find the QRS peaks and find heart rate an
detect some more cardiac diseases like sinus arythmia, myocardial infarctions etc
54
http://www.academia.edu
J.W. Zheng, Z.B. Zhang, T.H. Wu, Y. Zhang, A wearable mobihealth care system
supporting real-time diagnosis and alarm, Med. Bio. Eng. Comput. 45 (2007)
M. Unser, A. Aldroubi and M. Eden, On the asymptotic convergence of Bspline wavelets to Gabor functions, IEEE Trans. Inform. Theory 38 (2), 864-872,
1992
APPENDIX:
55