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Abstract
An amylase and lipase producing bacterium (strain C2) was enriched and isolated from soil regularly contaminated
with olive washing wastewater in Sfax, Tunisia. Cell was aerobic, mesophilic, Gram-negative, motile, non-sporulating
bacterium, capable of growing optimally at pH 7 and 30C and tolerated maximally 10% (W/V) NaCl. The predominant fatty acids were found to be C18:17c (32.8%), C16:17c (27.3%) and C16:0 (23.1%). Phylogenetic analysis of the
16S rRNA gene revealed that this strain belonging to the genus Pseudomonas. Strain C2 was found to be closely
related to Pseudomonas luteola with more than 99% of similarity. Amylase optimization extraction was carried out
using Box Behnken Design (BBD). Its maximal activity was found when the pH and temperature ranged from 5.5 to
6.5 and from 33 to 37C, respectively. Under these conditions, amylase activity was found to be about 9.48 U/ml.
Keywords: Pseudomonas luteola, Amylase, Lipase, Box Behnken Design
Introduction
Pseudomonas species, ubiquitous in soil and water [1,2],
are of considerable scientific and technological importance and comprise a taxon of metabolically versatile organisms capable of utilizing a wide range of simple and
complex organic compounds [3]. During the last few
years, Pseudomonas strains have been increasingly studied with increasing interest because of their importance
in the fields of medicine, food technology, environmental
microbiology and phytopathology [4]. They are known
to be involved in the biodegradation of natural and
toxic man-made chemical compounds. In addition, the
bacterial genus Pseudomonas is a prolific producer of a
number of extracellular enzymes, including lipase and
amylase [5].
-amylase (E.C 3.2.1.1) catalyses the hydrolysis of D-(1, 4) glycosidic linkages in starch and related carbohydrates. It is a key enzyme in the production of starch
derivatives and also widely used in food, textile, paper,
* Correspondence: imen.fendri@yahoo.fr
1
Facult des Sciences de Sfax, Unit de recherche Toxicologie- Microbiologie
Environnementale et Sant, Universit de, Sfax, Tunisia
Full list of author information is available at the end of the article
2014 Khannous et al.; licensee BioMed Central Ltd. This is an open access article distributed under the terms of the Creative
Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and
reproduction in any medium, provided the original work is properly cited.
upon the combination of two-level factorial and incomplete block designs [12,13]. The BBD method employs a
spherical design with excellent predictability within the
design space and it requires less experiment than the
FFD or CCD with the same number of factors [14]. In
addition, the BBD technique is rotatable or nearly rotatable regardless of the number of factors under consideration [14].
In our study, a new strain C2 was isolated from soil
regularly contaminated with olive washing wastewater
and the diversity of their extracellular hydrolytic enzymes (lipase and amylase) was studied. The results
showed that stain C2, which was identified as Pseudomonas luteola, had a high amylase activity. Optimization
extraction was carried out using Box Behnken Design
(BBD). This amylase showed a high activity, lead to
expect a great commercial value and a good prospect for
industrial applications.
Suspensions of 1% (w/v) soil sample from ground contaminated with industrial wastewater were incubated
with the medium at 30C under agitation at 180 rpm for
72 hours. The dominant microorganisms of this consortium were isolated by spreading 0.1 ml of tenfold serial
solution on Petri dishes containing screening medium
agar [2,15]. The various colonies were picked, isolated in
pure cultures and then stored at 80C. Among the
strains isolated, the bacterial colony named strain C2
was used for further experiments.
Page 2 of 9
Strain characterization
The amount of the reducing sugars released by the action of amylases on starch was currently performed at
60C and pH 5 for 10 min [7]. The reaction mixture
Page 3 of 9
Page 4 of 9
X1, pH
10
30
37
44
12
24
36
y b0
k
X
bi X i
i1
k
X
bii X i
i<j
X
i
i1
bij X i X j
j
Factors
Response: amylase
activity (U/ml)
X1
X2
X3
4.49
9.14
1.7
7.08
9.42
1.8
8.97
4.48
10
5.45
11
12
8.31
13
3.65
14
8.68
15
5.97
9.48
Isolation of bacteria
Page 5 of 9
Strain C2
Pseudomonas luteola
Gram stain
Catalase
Strain C2
P. luteola
C10:0 3OH
3.4
3.8
C12:0
5.2
6.9
Oxidase
Motility
C12:0 2OH
3.3
3.2
2.1
3.5
Colour
nd
C12:0 3OH
30
30
C14:0
0.8
1.0
C16:0
23.1
18
Growth at 40C
C18:0
0.4
0.2
ND
0.3
Optimum pH growth
7.2
C19:0 CYCLO 8c
Denitrification
C16:17c
27.3
23.3
C18:17c
32.8
39.7
Gelatinase
Amylase
+
+
nd
Citrate
Malate
Maltose
Assimilation of:
Mannitol
Mannose
Phylogenetic analysis
Glucose
Lipid degradation
Antibiotic susceptibility
The effect of the temperature and the pH on the amylase activity in the supernatant was performed by its
incubation at different temperatures ranging from 40
to 100C and at pH ranging from 4 to 10.5. The highest
amylase activity was given at 60C and at pH 5 (data
Page 6 of 9
Figure 1 Phylogenetic dendrogram based on 1247 unambiguous bp of the 16S rRNA sequences indicating the position of
Pseudomonas luteola strain C2 and its closest relative sequences validated at species level in the genus Pseudomonas.
Conclusion
A strain isolated from a sample of soil was selected for
its ability to produce amylase. This isolate was identified
by 16S rRNA gene sequences analysis as P. luteola.
Amylase optimization extraction was carried out using
Box Behnken Design (BBD). The effect of three really influencing variables: temperature (C), pH and incubation
time (h) on amylase activity was investigated. Its maximal activity was in the pH and temperature ranged
from 5.5 to 6.5 and from 33 to 37C, respectively. Under
these conditions, the C2 amylase activity can reach 9.48
U/ml. The cloning and expression of its amylase is
under current investigation.
Table 5 Statistical parameters obtained from the ANOVA test performed for the model
Source of variation
Regression
85.2004
Residues
6.4013
Average square
Fisher number
Signification
R2
9.4667
155.3619
0.641**
0.93
1.2803
A)
Page 7 of 9
Incubation
Time (h)
pH
pH
B)
Incubation
Time (h)
Temperature (C)
Temperature (C)
C)
Temperature (C)
Temperature (C)
pH
pH
Figure 2 Surface graphs of response Y (amylase activity U/ml) showing the effects of variables: A, effect of the incubation time versus
pH; B, effect of the incubation time versus temperature; C, effect of the temperature versus pH.
Competing interests
The authors declare that they have no competing interests.
Authors contributions
LK, MJ, NC, MD, RM and MB performed the experiments. LK, NG and IF
designed the experiments, analyzed the data and conceived research. LK
drafted the manuscript. LK, NG and IF have approved the final version of the
manuscript. All authors read and approve the final manuscript.
Acknowledgments
The authors are grateful to Engineer Nihed Ben Halima for fruitful discussions
and for her help. The authors would like to express their gratitude to
Professor Radhouane Gdoura for his help.
Author details
1
Facult des Sciences de Sfax, Unit de recherche Toxicologie- Microbiologie
Environnementale et Sant, Universit de, Sfax, Tunisia. 2Laboratoire de
Biotechnologie des Plantes, Facult des Sciences de Sfax, Universit de Sfax,
Sfax, Tunisia. 3Dpartement de gnie biologique, Ecole Nationale
dIngnieurs de Sfax, Universit de Sfax, Sfax, Tunisia.
Received: 23 August 2013 Accepted: 28 December 2013
Published: 9 January 2014
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