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Malaysia.
Centre for Biodiversity Research, Universiti Tunku Abdul Rahman, Bandar Barat,
Abstract
Hypertension is a common but complex human disease, which can lead to a heart
attack, stroke, kidney disease or other complications. Since the pathogenesis of
hypertension is heterogeneous and multifactorial, it is crucial to establish a
comprehensive metabolomic approach to elucidate the molecular mechanism of
hypertension. Although there have been limited metabolomic, lipidomic and
pharmacometabolomic studies investigating this disease to date, metabolomic studies
on hypertension have provided greater insights into the identification of
disease-specific biomarkers, predicting treatment outcome and monitor drug safety
and efficacy. Therefore, we discuss recent updates on the applications of
metabolomics technology in human hypertension with a focus on metabolic
biomarker discovery.
Introduction
basis
and
further
associated
with
diseases
or
treatments.
manner and also used for biomarkers validation (Griffiths et al. 2010; Wei et al. 2010).
Targeted metabolomics is the measurement of a select group of metabolites, typically
focusing on one or more related pathways of interest (Dudley et al. 2010). It is
normally performed using mass spectrometry (MS) based approach. By taking this
approach, a novel association between metabolites and diseases may be revealed and
enables a more comprehensive understanding on metabolic functions and pathways
(Roberts et al. 2012).
Sample Preparation
Analytical Instrumentation
gas
chromatography-MS
(GC-MS),
gas
chromatography-flame
13
C-,
N- and
15
31
Athersuch, 2011). The principle of NMR involved the absorption of radiant energy by
atomic nuclei (1H) in the presence of a magnetic field (Lane, 2012). At the same field,
different atomic nuclei within a molecule will generate different resonance
frequencies. These signals will provide the chemical and structural information on the
detected molecule.
However, NMR has relatively low analytical sensitivity that detects only
high-abundance metabolites, thus leads to a requirement for greater initial sample
volume (Bothwell and Griffin, 2011). Moreover, complex datasets may result in peaks
overlapping or similar coupling constants in one-dimensional NMR. This can be
overcome by applying two- and three-dimensional NMR spectroscopy methods such
as J-resolved spectroscopy, spin-echo correlated spectroscopy, diffusion ordered
spectroscopy and ultrafast J-Resolved correlation spectroscopy (Ludwig and Viant
2009; Dunn et al. 2011; Larive et al. 2015). Furthermore, high-resolution magic angle
spinning (HRMAS) NMR spectroscopy can be performed on intact tissues without
sample preparation (Bothwell and Griffin, 2011; Larive et al. 2015). During the
process, sample is spun at magic angle (54o44) to the magnetic field with high speed
(2,000-6,000 Hz), in order to reduce or remove the chemical shift anisotropy and
dipole-dipole couplings (Salek et al. 2011).
The high resolution of GC combined with the MS detection, and more recently
GCGC-MS, provides an excellent system for performing global metabolic profiling,
with the help of metabolome databases in the identification of unknown compounds
(Patti et al. 2012). However for GC-MS based method, sample derivatization is
required prior to data acquisition. For aqueous metabolites, the common practice is to
use a two-step derivatization processes (methoximation followed by silylation) prior
to GC-MS analysis to reduce polarity and increase thermal stability and volatility
(Cheng et al. 2014). The benefits of GC-MS based strategies may include very high
resolution, good sensitivity and robustness; these are further enhanced by a two
dimensional GCGC-MS. The metabolites elute from the first column are separated
based on volatility and followed by polarity in the second column (Lenz and Wilson
2007).
Compared to NMR and GC-MS, LC-MS based method is able to detect a larger
numbers (200-500) of metabolites, and therefore has been recommended for global
metabolite profiling (Patti et al. 2012). In many ways, LC-MS analysis can be
performed using reversed-phase gradient chromatography, electrospray ionization
probe and Z-spray ion source in order to obtain the most comprehensive metabolic
profile (Cheng et al. 2014). LC-MS may reduce the interference between analytes and
background by improving gaps (ion suppression) or peaks (ion enhancement) signals
(Lenz and Wilson 2007). However, it is suggested that identified metabolites have to
be confirmed and validated with authentic metabolic standards.
Data acquisition and analysis are conducted to identify the particular metabolites
that could potentially serve as biomarkers for diseases. Putative identification of
metabolites is initially carried out by matching the actual m/z values and theoretical
m/z values in various databases such as Human Metabolome Database
(http://www.hmdb.ca/),
(http://www.lipidmaps.org/),
HumanCyc
MassBank
(http://humancyc.org/),
LipidMaps
(http://www.massbank.jp/?lang=en)
and
Metabolomics data has been analyzed with a wide range of statistical analyses, in
order to reduce the number of variables and examine the difference between groups
(Bartel et al. 2013). These analyses can be classified into either univariate analysis of
t-test and ANOVA (analysis of variance) or multivariate analysis such as the widely
used PCA (principal components analysis), PLS (Partial least squares) regression, and
PLS-DA (PLS-discriminant analysis). In addition, metabolomics data have also been
analysed
using
MANOVA
(multivariate
analysis
of
variance),
ASCA
(Support vector machines) and Random Forest (Sugimoto et al. 2012; Bartel et al.
2013). Differential metabolic profiles between two groups can be compared using
parametric Student t-tests and Wilcoxon rank sum nonparametric tests, while ANOVA
test is applied for multiple groups (Bartel et al. 2013). In contrast, multivariate
methods analyzed and compared between different metabolic features and interactions
between them (Bartel et al. 2013; Alonso et al. 2015). These multivariate analyses can
be classified into unsupervised (PCA, ASCA, HCA and SOMs) and supervised (PLS
regression, OPLS, SIMCA and SVM) methods (Sugimoto et al. 2012; Bartel et al.
2013). Unsupervised methods analyze data irrespective to the type of study samples;
whereas supervised methods categorize the study samples according to the
phenotypes prior to analysis and more appropriate for constructing risk prediction
models (Alonso et al. 2015).
data
analysis
and
(http://www.genome.ad.jp/kegg/),
(http://medicago.vbi.vt.edu),
MetaCyc (http://metacyc.org/),
visualization
BioCyc
MapMan
tools,
including
(http://biocyc.org/),
KEGG
DOME
(http://gabi.rzpd.de/projects/MapMan/),
MetNet (http://metnet.vrac.iastate.edu/)
KaPPA-View (http://kpv.kazusa.or.jp/kappa-view/)
and
2015; Sas et al. 2015). Other bioinformatics tools for pathway mapping and network
visualization include Paintomics, VANTED (Visualization and Analysis of Networks
containing Experimental Data), and MetaboAnalyst. In order to build a network of
genes-metabolites pathways interaction, several network tool such as MetScape,
MBRole (Metabolites Biological Role), MSEA (Metabolite Set Enrichment Analysis),
MetaMapp, 3Omics, ProMeTra and mummichog attempted to extend this approach to
metabolite biomarkers discovery (Shulaev 2006; Johnson et al. 2015; Sas et al. 2015).
Metabolomic Biomarkers
Several lines of evidence also indicated that free fatty acids were significantly
associated with the development of hypertension (Fagot-Campagna et al. 1998; Wang
et al. 2008), possibly by regulating vascular tone and microvascular function,
inhibiting endothelium-dependent vasodilatation and increasing blood pressure (de
Jongh et al. 2004; Spijkers et al. 2011). Furthermore, increased levels of free fatty
acids may contributed to hypertension through the alteration of membrane
microviscosity and lipid metabolism, by modulating ion transport, pH regulation,
intracellular Ca2+ handling and signaling pathway (Zicha et al. 1999). Interestingly,
findings from metabolomic studies indicated that the levels of very low-density
lipoprotein, low-density lipoprotein, acetone, 1-stearoylglycerol, 1-palmitoylglycerol,
and free fatty acids such as oleic acid, nonanoic acid, ecosanoic acid, hexanoic acid,
and heptanoic acid were significantly higher among hypertensive patients compared
to normotensive controls (Liu et al. 2011; Zhong et al. 2014).
isoleucine,
lysine,
homocysteine,
ornithine,
tyrosine,
lysine,
tyrosine,
tryptophan,
cystin,
hexenoylcarnitine
and
predictor of hypertension (De Meyer et al. 2008; Liu et al. 2011). Likewise, uric acid
and allantoin were observed at higher levels in hypertensive patients, in contrast to
dimethyluracil and methyluric acid (Liu et al. 2011; van Deventer et al. 2015; Wang et
al. 2015). The underlying mechanism could be explained by the regulation of urinary
sodium (Na) homeostasis via an effect of diuresis and natriuresis (Cirillo et al. 2002).
In hypertensive patients, urinary urea was inversely associated with blood pressure, as
the higher urea level may reduce glomerular filtration rate and impaired renal function
(Cirillo et al. 2002; Martin et al. 2005).
Notably,
microbial
metabolites
(such
as
formate,
hippurate,
4-hydroxyhippurate and lyxose) detectable blood and urine in humans were found
significantly changed and can be associated with to the development of hypertension
(Hao et al. 2016, Holmes et al. 2008; Zheng et al. 2013). Together, these finding
shows a promising future research direction for hypertension.
Lipidomic Biomarkers
metabolites were
ether
phosphatidylcholine,
ether
phosphatidylethanolamine,
Pharmacometabolomic Biomarkers
Beta blockers, or known as beta-adrenergic blocking agents, may lower the blood
pressure by blocking the effects of epinephrine (adrenaline) and norepinephrine
(noradrenaline) hormones on b-adrenergic receptors (Frishman 2003). Free fatty acids
such as oleic acid, linoleic acid, palmitoleic acid, palmitic acid, 3-hydroxybutanoic
acid, arachidonic acid, 3-hydroxybutyrate methyl-hexadecanoic acid, dihomolinoleate,
10-nonadecenoate, stearic acid, myristic acid and heptadecanoic acid were
significantly decreased in patients treated with beta-blockers. Meanwhile, elevated
levels of sugar alcohol (including threitol, arabitol, allo-inositol) and amino acids
(including pyroglutamine, homocitrulline, salicylate, hydroxyisovaleroyl-carnitine,
2-methylbutyroyl-carnitine) were observed. Beta-blockers (both propanolol and
atenolol) may attenuate lipolysis by lowering the plasma free fatty acid levels
(Deacon, 1978). Lipolysis is stimulated by catecholamine hormones, including
adrenaline and noradrenaline, and is regulated by the beta-adrenergic receptors (Millet
et al. 1998). Therefore, it seems that beta-blockers may cause metabolic changes in
fatty acid biosynthesis and glycerolipid metabolism pathways. Moreover, these
the
formation
of
tryptophan
related
metabolites,
including
concentration are direct side-effect of thiazide diuretics, which may affect the risk of
gout among patients with hypertension (McAdams DeMarco et al. 2012).
Statins and fribates are both lipid-lowering drugs that can prevent the
fibrates
users,
several
intermediate
metabolites
of
fenofibrate
Conclusions
Metabolomics has been applied in hypertension studies to gain new insights into
pathophysiological processes underlying hypertension, discover metabolite markers
for early risk prediction and monitor the efficacy and side effects of drugs treatment.
A number of studies had highlighted perturbation in amino acids metabolism in
Acknowledgment
Decreased concentrations
Technique Statistical
s
analysis
employed
Reference
s
Alanine
1H-NMR
Choline
GC-TOFMS
GC-MS
and
PCA
H-NMR
OPLS-DA Holmes et
al. 2008
OPLS and
PLS-DA
De Meyer
et al. 2008
Zheng et
al. 2013
LC-MS
Very low density lipoprotein, low density lipoprotein, lactic
acid, acetone and acetylformic acid
1H-NMR
PLS-DA, Zhong et
OPLS-DA al. 2014
and t-test
GC-MS
PCA,
Mann-Wh
itney-Wil
coxon
Wang et
al. 2015
GC-MS
and
LC-MS
PCA
van
Deventer
et al. 2015
GC-MS
t-test/
Wilcoxon
rank sum
test
Hao et al.
2016
1H-NMR
Statistical
analysis
Reference
s
Ether phosphatidylcholine(36:4, 36:5, 38:4, 38:5, 34:2, 36:3, 34:1, 40:5) and ether LC-ESIphosphatidylethanolamine(38:5, 38:6, 40:5)
MS/MS
SOLAR
software
Graessler
et al. 2009
PCA,
ANOVA
Hu et al.
20011
PCA,
MANCO
VA,
ANOVA
Kulkarni
et al. 2013
Technique
s
employed
Pharmacometabolomic markers
Increased concentrations
Statistical
analysis
Reference
s
GC-TOFMS
Wilcoxon
signed
rank
Wikoff et
al. 2013
Pyroglutamine, homocitrulline,
Serotonin, dihomolinoleate,
3-hydroxybutyrate, 10-nonadecenoate,
margarate, and eicosenoate
UHPLCMS-MS
and
GC-MS
Linear
regression
test
Altmaier
et al. 2014
GC-TOFMS
Wilcoxon
Rotroff et
al. 2015
Pseudouridine, c-glycosyl-tryptophan,
glutarylcarnitine, homocitrulline and urate
Phenylalanyl-phenylalanine
UHPLCMS-MS
and
Linear
regression
Thiazide
diuretics
Decreased concentrations
Technique
s
employed
signed-ran
k test
Altmaier
et al. 2014
GC-MS
test
Uric acid, ribonic acid, 1-hexadecanol, Threonine, aminomalonic acid, glutamine, GC-TOFerythritol,
kynurenine, serine, phytol, phosphoethanolamine and MS
glycero-gulo-heptose,
dihydroabietic methoxytryosine
acid, 2-ketoisocaproic acid, aconitic acid,
behenic acid, glucose 1-phosphate and
glycine
Wilcoxon
ACE
inhibitors
Des-Arg9-bradykinin
Statins
1-Arachidonoyl-glycerophosphocholine,
7-alpha-hydroxy-3-oxo-4-cholestenoate,
1-arachidonoylglycerol-phosphoethanolami 1-palmitoyl-glycero-phosphoinositol,
ne, isobutyrylcarnitine,
lathosterol and glycochenodeoxycholate
1-docosahexaenoyl-glycerophosphocholine,
alpha-tocopherol and uridine
Linear
regression
test
Fibrates
2-Hydroxyisobutyrate, 3-dehydrocarnitine,
riboflavin, pantothenate, indolelactate,
carnitine, pipecolate and uridine
Phenylalanyl-phenylalanine and
aspartyl-phenylalanine
Pyroglutamine
UHPLCMS-MS
and
GC-MS
signed-ran
k test
Rotroff et
al. 2015
Altmaier
et al. 2014
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