List of restriction enzyme cutting sites: A - Wikipedia, the free encyclopedia https://en.wikipedia.

org/wiki/List_of_restriction_enzyme_cutting_sites:_A

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List of restriction enzyme cutting sites: A

From Wikipedia, the free encyclopedia

This article contains a list of the most studied restriction enzymes whose names start with A. It contains approximately 30 enzymes.
The following information is given:

Enzyme: Accepted name of the molecule, according to the internationally adopted nomenclature[1][2], and bibliographical references.
(Further reading: see the section "Nomenclature" in the article "Restriction enzyme".)
PDB code: Code used to identify the structure of a protein in the PDB database of protein structures. The 3D atomic structure of a
protein provides highly valuable information to understand the intimate details of its mechanism of action[3][4].
Source: Organism that naturally produces the enzyme.
Recognition sequence: Sequence of DNA recognized by the enzyme and to which it specifically binds.
Cut: Cutting site and DNA products of the cut. The recognition sequence and the cutting site usually match, but sometimes the cutting
site can be dozens of nucleotides away from the recognition site[5][6].
Isoschizomers and neoschizomers: An isoschizomer is an enzyme that recognizes the same sequence as another. A neoschizomer is a
special type of isoschizomer that recognizes the same sequence as another, but cuts in a different manner. A maximum number of 8-10
most common isoschizomers are indicated for every enzyme but there may be many more. Neoschizomers are shown in bold and green
color font (e.g.: BamHI). When "None on date" is indicated, that means that there were no registered isoschizomers in the databases on
that date with a clearly defined cutting site. Isoschizomers indicated in white font and grey background correspond to enzymes not
listed in the current lists:
as in this not listed enzyme: EcoR70I

Legend of nucleobases
Nucleotide
represented

Code
A

Adenine (A)

Cytosine (C)

Thymine (T)

Guanine (G)

A, C, G or T

A or C

A or G

A or T

C or T

C or G

A, C or T

A, C or G

G or T

Contents

C, G or T

A, G or T

1 Whole list navigation

2 Restriction enzymes
2.1 A
3 Notes

Whole list navigation

Main page A Ba-Bc Bd-Bp Bsa-Bso Bsp Bsr-Bss Bst Bsu-Bv C D E F G H I K L M N O P R S T U V X Y Z External links See also

Restriction enzymes

Enzyme

Source

Recognition sequence

Cut

AaaI

Arthrobacter aurescens

5' TGTACA

5' ---T

AatII [7]

Acetobacter aceti (IFO 3281)

5' GACGTC

5' ---GACGT
3' ---C

TGCAG--- 5'

AbaI

Azospirillum brasilense UQ 1796

5' TGATCA

5' ---T

GATCA--- 3'

AbeI

Azotobacter beijerinckii Slo 54-028

5' CCTCAGC

5' ---CC

AbrI

Azospirillum brasilense

5' CTCGAG

5' ---C

TCGAG--- 3'

[10][11]

Acinetobacter calcoaceticus

5' GTMKAC

5' ---GT

MKAC--- 3'

FblI, XmiI

AccII [8][12]

Acinetobacter calcoaceticus

5' CGCG

5' ---CG

CG--- 3'

Bsh1236I, Bsp50I, BstFNI,

BstUI, MvnI, SelI, BceBI, BepI,
Bpu95I

AccIII [13]

Acinetobacter calcoaceticus

5' TCCGGA

5' ---T

Acc16I

Acinetobacter calcoaceticus 16

5' TGCGCA

5' ---TGC

Acc36I [14]

Acinetobacter calcoaceticus 36

5' ACCTGC

5' ---ACCTGCN3N

AccI [8][9]

PDB code

3' ACATGT
3' CTGCAG
3' ACTAGT
3' GGAGTCG
3' GAGCTC

3' CAKMTG

3' GCGC

3' AGGCCT
3' ACGCGT
3' TGGACG

3' ---ACATG

3' ---ACTAG
3' ---GGAGT
3' ---GAGCT

3' ---CAKM

3' ---GC

3' ---AGGCC

Isoschizomers

BsmRI, Bsp1407I, BsrGI,

BstAUI, Ssp4800I, SspBI

GTACA--- 3'
T--- 5'
C--- 3'

- None on Sept. 2015 BclI, BsiQI, BspXII,

BstT7I, FbaI, Ksp22I, ParI

T--- 5'

TCAGC--- 3'
CG--- 5'
C--- 5'

TG--- 5'

GC--- 5'

T--- 5'

AosI, AviII, FdiII, FspI, MstI,

NsbI, PamI, Pun14627I

GCA--- 3'
CGT--- 5'

3' ---TGGACGN3NNNNN

BluI, BspAAI, BssHI, EscI,

PaeR7I, SciI, Sfr274I,
Sol10179I, StrI, TliI

Aor13HI, BbvAIII, BlfI, BseAI,

BsiMI, BspEI, CauB3I, Kpn2I,
MroI, PtaI

CCGGA--- 3'

3' ---ACG

BbvCI

NNNN--- 3'
--- 5'

BfuAI, BspMI, BveI

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Acc65I [15]

Acinetobacter calcoaceticus 65

5' GGTACC

5' ---G

Acc113I

Acinetobacter calcoaceticus 113

5' AGTACT

5' ---AGT

AccB1I

Acinetobacter calcoaceticus B1

5' GGYRCC

5' ---G

AccB2I

Acinetobacter calcoaceticus B2

5' RGCGCY

5' ---RGCGC

AccB7I [16]

Acinetobacter calcoaceticus B7

5' CCAN5TGG

5' ---CCANNNN

AccBSI [17]

Acinetobacter calcoaceticus BS

5' CCGCTC

5' ---CCG

AccEBI

Acinetobacter calcoaceticus EBF 65/65

5' GGATCC

5' ---G

GATCC--- 3'

AsiI, BamHI, Bce751I, Bsp98I,

BspAAIII, CelI, OkrAI,
Uba4009I

AceI

Anabaena cedrorum

5' GCWGC

5' ---G

CWGC--- 3'

ApeKI, SuiI, Taq52I, TseI

AceII

Anabaena cedrorum

5' GCTAGC

5' ---GCTAG

AceIII

Anabaena cedrorum

5' CAGCTC

5' ---CAGCTCN4NN

AciI [18][19]

Arthrobacter citreus

5' CCGC

5' ---C

AclI [20]

Acinetobacter calcoaceticus M4

5' AACGTT

5' ---AA

CGTT--- 3'

AclNI

Acinetobacter calcoaceticus N20

5' ACTAGT

5' ---A

CTAGT--- 3'

AclWI

Acinetobacter calcoaceticus W2131

5' GGATC

5' ---GGATCNNNN

AcpI

Acidiphilium cryptum 25H

5' TTCGAA

5' ---TT

AcpII

Acidiphilium cryptum 25H

5' CCAN5TGG

5' ---CCANNNN

AcrII

Anabaenopsis circularis

5' GGTNACC

5' ---G

GTNACC--- 3'

AspAI, Bse64I, BseT9I, BstEII,

BstPI, Eco91I, EcoO65I, PspEI

AcsI [21]

Arthrobacter citreus 310

5' RAATTY

5' ---R

AATTY--- 3'

ApoI, CfaI, FsiI, XapI,

AcuI

Acinetobacter calcoaceticus

5' CTGAAG

5' ---CTGAAGN12NNNN

AcvI

Aeromonas caviae

5' CACGTG

5' ---CAC

AcyI [22]

Anabaena cylindrica

5' GRCGYC

5' ---GR

AdeI

Alcaligenes denitrificans Ss 3-028

5' CACNNNGTG

5' ---CACNNN

AeuI

Achromobacter eurydice

5' CCWGG

5' ---CC

WGG--- 3'

AfaI [23]

Acidiphilium facilis 28H

5' GTAC

5' ---GT

AC--- 3'

Afa22MI

Acidocella facilis

5' CGATCG

5' ---CGAT

Afa16RI

Acidiphilium sp. 16R

5' CGATCG

5' ---CGAT

3' CCATGG
3' TCATGA
3' CCRYGG
3' YCGCGR
3' GGTN5ACC
3' GGCGAG
3' CCTAGG
3' CGWCG

3' CGATCG

3' GTCGAG
3' GGCG
3' TTGCAA
3' TGATCA

3' CCTAG

3' AAGCTT
3' GGTN5ACC
3' CCANTGG
3' YTTAAR
3' GACTTC
3' GTGCAC
3' CYGCRG
3' GTGNNNCAC
3' GGWCC
3' CATG
3' GCTAGC

3' GCTAGC

3' ---CCATG

GTACC--- 3'

3' ---Y

TGA--- 5'
G--- 5'

3' ---C

NTGG--- 3'

NNNNACC--- 5'
CTC--- 3'

3' ---TTGC
3' ---TGATC

G--- 5'

G--- 5'

3' ---AAGC
3' ---GGTN

3' ---CCANTG
3' ---YTTAA

GATCG--- 5'
NNNN--- 3'
--- 5'

CGC--- 3'

3' ---CYGC
3' ---GTG
3' ---GGW
3' ---CA
3' ---GC

3' ---GC

BspOI, LlaG2I,

None on May 2010

SsiI

G--- 5'

Psp1406I

AA--- 5'

AhlI, BcuI, SpeI

A--- 5'

N--- 3'

--- 5'

TT--- 5'
NTGG--- 3'

NNNNACC--- 5'
G--- 5'

R--- 5'

--- 3'

NN--- 5'

GTG--- 3'
CAC--- 5'
CGYC--- 3'
RG--- 5'
GTG--- 3'

NNNCAC--- 5'
CC--- 5'

TG--- 5'
CG--- 3'

TAGC--- 5'
CG--- 3'

TAGC--- 5'

AlwI,
BinI,

BpuFI,
BsrWI,

BspPI,

BstH9I, Bst31TI, EacI, Ral8I

Asp10HI, Bpu14I, Bsp119I,

BstBI, Csp45I, FspII, MlaI,
NspV, SspRFI

CGAA--- 3'

3' ---GACTTCN12NN
3' ---GTG

AsuNHI,
BmtI,
NheI,
PstNHI

C--- 3'

3' ---CCTAGNNNNN

AcpII, Asp10HII, BasI,

Esp1396I, PflBI, PflMI, Van91I
BsrBI, BstD102I, Bst31NI, MbiI

GAG--- 5'

3' ---GTCGAGN4NNNNNN
3' ---GGC

BfoI, Bme142I, Bsp143II,

BstH2I, HaeII, LpnI

Y--- 3'

CGCGR--- 5'

3' ---GGC

3' ---CGWC

BanI, BbvBI, BshNI, BspT107I,

Eco64I, HgiCI, HgiHI, MspB4I

GYRCC--- 3'

3' ---GGTN

3' ---CCTAG

AssI, BmcAI, Bpa34I, DpaI,

Eco255I, RflFII, ScaI, ZrmI

ACT--- 3'

3' ---TCA
3' ---CCRYG

AhaB8I, Asp718I, KpnI, SthI

G--- 5'

AccB7I, Asp10HII, BasI,

Esp1396I, PflBI, PflMI, Van91I

BspKT5I, Eco57I
BbrPI, BcoAI, Eco72I, PmaCI,
PmlI, PspCI
AhaII, AosII, BbiII, BsaHI,
BstACI, Hin1I, HgiI, Hsp92I,
Msp17I
BstIZ316I, DraIII
AglI, AjnI, BseBI, BstNI, BstOI,
Bst2UI, EcoRII, SleI, SspAI
Csp6I, CviQI, CviRII, HpyBI,
PabI, PlaAII, RsaI, RsaNI

Afa16RI, BspCI, EagBI, ErhB9I,

NblI, Ple19I, Psu161I, PvuI,
RshI
Afa22MI, BspCI, EagBI, MvrI,
NblI, Ple19I, PvuI, Psu161I,
RshI, XorII

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AfeI [24]

Alcaligenes faecalis T2774

5' AGCGCT

5' ---AGC

AflI [25]

Anabaena flos-aquae

5' GGWCC

5' ---G

GWCC--- 3'

Anabaena flos-aquae

5' CTTAAG

5' ---C

TTAAG--- 3'

[25][28]

Anabaena flos-aquae

5' ACRYGT

5' ---A

CRYGT--- 3'

AgeI [18][29]

Agrobacterium gelatinovorum

5' ACCGGT

5' ---A

CCGGT--- 3'

AglI[30]

Arthrobacter globiformis

5' CCWGG

5' ---CC

WGG--- 3'

AhaI

Alteromonas haloplanktis B8

5' CCSGG

5' ---CC

SGG--- 3'

AhaII

Aphanothece halophytica

5' GRCGYC

5' ---GR

CGYC--- 3'

[10][26]

Aphanothece halophytica

5' TTTAAA

5' ---TTT

AhaB8I

Aphanothece halophytica

5' GGTACC

5' ---G

AhdI [32][33]

Aeromonas hydrophila

5' GACN5GTC

5' ---GACNNN

AhlI

Alteromonas haloplanktis SP

5' ACTAGT

5' ---A

CTAGT--- 3'

AclNI, BcuI, SpeI

AhyI

Aeromonas hydrophila

5' CCCGGG

5' ---C

CCGGG--- 3'

Cfr9I, CfrJ4I, EaeAI, EclRI,

PaeBI, SmaI, TspMI, XmaI,
XmaCI

AitI

Aquaspirillum itersonii

5' AGCGCT

5' ---AGC

AjnI

Acinetobacter johnsonii R2

5' CCWGG

5' ---

AjoI

Acinetobacter johnsonii 35

5' CTGCAG

5' ---CTGCA

AleI

Aureobacterium liquefaciens

5' CACN4GTG

5' ---CACNN

AlfI

Acinetobacter lwoffii BH 32

5' GCAN6TGC

5' ---GCAN6TGCN9NNN

AliI

Acetobacter liquefaciens

5' GGATCC

5' ---G

AliAJI

Acetobacter liquefaciens AJ 2881

5' CTGCAG

5' ---CTGCA

AloI [34][35]

Acinetobacter lwoffii Ks 4-8

5' GAACN6TCC

5' ---GAACN6TCCN6NNNNNN

[36][37]

Arthrobacter luteus

5' AGCT

5' ---AG

AlwI

Acinetobacter lwoffii

5' GGATC

5' ---GGATCN3N

Acinetobacter lwoffii RFL21

5' GWGCWC

5' ---GWGCW

AflII

[25][26][27]

AflIII

AhaIII
[27][31]

AluI [8][10]
[38][39]

Alw21I

3' TCGCGA
3' CCWGG
3' GAATTC
3' TGYRCA
3' TGGCCA
3' GGWCC

3' GGSCC

3' CYGCRG

3' AAATTT

3' CCATGG
3' CTGN5CAG
3' TGATCA
3' GGGCCC
3' TCGCGA
3' GGWCC
3' GACGTC
3' GTGN4CAC
3' CGTN6ACG
3' CCTAGG

3' GACGTC
3' CTTGN6AGG

3' TCGA

3' CCTAG

3' CWCGWG

GCT--- 3'

3' ---TCG
3' ---CCWG
3' ---GAATT
3' ---TGYRC
3' ---TGGCC

AAA--- 3'

DraI, PauAII, SruI

TTT--- 5'
GTACC--- 3'

Acc65I, Asp718I, KpnI, SthI

G--- 5'

NNGTC--- 3'

NNNCAG--- 5'
A--- 5'
C--- 5'

GCT--- 3'

AorI, ApaORI, ApyI, EcoRII,

MvaI, Psp6I, PspGI, SleI, SspAI

CCWGG--- 3'
--- 5'

G--- 3'

AjoI, ApiI, BloHII, BspMAI,

CfrA4I, CfuII, PstI, SalPI, SflI,
Srl5DI

NNGTG--- 3'

OliI

ACGTC--- 5'
NNCAC--- 5'
--- 3'

NN--- 5'

GATCC--- 3'
G--- 5'

3' ---CTTGN6AGGN6N

GA--- 5'

3' ---CCTAGN3NN

--- 3'

NNNNN--- 5'

CT--- 3'

N--- 3'
--- 5'

C--- 3'

WCGWG--- 5'

None on May 2010

AccEBI, BamHI, Bce751I,
Bsp98I, BspAAIII, Nsp29132II,
Pfl8I

ApiI, Asp713I, BspMAI, CflI,

CstI, MhaAI, PstI, SalPI, Sst12I,
YenI

G--- 3'

ACGTC--- 5'

3' ---TC

AspEI, BmeRI, BspOVI, DriI,

Eam1105I, EclHKI, NruGI

AfeI, Aor51H, Eco47III, FunI

CGA--- 5'

3' ---CGTN6ACGN9N

3' ---C

AcyI, AstWI, AsuIII, BsaHI,

BstACI, Hin1I, HgiI, HgiDI,
HgiHII, PamII

RG--- 5'

3' ---GTGNN

3' ---G

AseII,
BpuMI, CauII,
BcnI,
Eco1831I, EcoHI, HgiS22I,
NciI

CC--- 5'

3' ---TCG

3' ---CCTAG

AeuI, Bse16I, Bse17I, Bse24I,

BshGI, EcoRII, SleI, SniI, SslI

CC--- 5'

3' ---CTGNN

3' ---G

AsiAI, AsiGI, BshTI, CsiAI,

CspAI, PinAI

A--- 5'

3' ---AAA

3' ---GGWCC

Asp90I

A--- 5'

3' ---CYGC

3' ---GGGCC

BfrI, BspTI, Bst98I, BstAFI,

BstPZ740I, Esp4I, MspCI,
Vha464I

C--- 5'

3' ---GGS

3' ---TGATC

Asp745I, BamNxI, BcuAI, CauI,

Csp68KI, DsaIV, Eco47I, SinI

G--- 5'

3' ---GGW

3' ---CCATG

AitI, Aor51H, Eco47III, FunI

CGA--- 5'

None on May 2010

AluBI, MltI
AclWI, BinI, BspPI, BsrWI,

BstH9I, BthII, Bth617I, EacI

AspHI, Bbv12I, Bsh45I,
BsiHKAI,
HgiAI, MspV281I
Bsm6I,

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Acinetobacter lwoffii RFL26

5' GTCTC

5' ---GTCTCN

Alw44I

Acinetobacter lwoffii RFL44

5' GTGCAC

5' ---G

AlwNI [41]

Acinetobacter lwoffii N

5' CAGNNNCTG

5' ---CAGNNN

AlwXI

Acinetobacter lwoffii X

5' GCAGC

5' ---GCAGCN7N

Ama87I

Alteromonas macleodii 87

5' CYCGRG

5' ---C

AocI

Anabaena sp.

5' CCTNAGG

5' ---CC

AocII

Anabaena sp.

5' GDGCHC

5' ---GDGCH
3' ---C

HCGDG--- 5'

AorI

Acetobacter aceti orleanensis

5' CCWGG

5' ---CC

WGG--- 3'

Aor13HI [42]

Acidiphilium organovorum 13H

5' TCCGGA

5' ---T

CCGGA--- 3'

Aor51HI [43]

Acidiphilium organovorum 51H

5' AGCGCT

5' ---AGC

GCT--- 3'

AfeI, AitI, Eco47III, FunI

AosI

Anabaena oscillarioides

5' TGCGCA

5' ---TGC

GCA--- 3'

Acc16I, AviII, FdiII, FspI, MstI,

NsbI, PamI, Pun14627I

AosII

Anabaena oscillarioides

5' GRCGYC

5' ---GR

[18][27][44]

Acetobacter pasteurianus pasteurianus

5' GGGCCC

5' ---GGGCC

ApaBI [45]

Acetobacter pasteurianus B

5' GCAN5TGC

5' ---GCANNNNN

ApaCI

Acetobacter pasteurianus C

5' GGATCC

5' ---G

GATCC--- 3'

AliI, BamHI, BnaI, Bsp4009I,

BstI, NspSAIV, Pfl8I, SolI, SurI

[46][47]

Acetobacter pasteurianus

5' GTGCAC

5' ---G

TGCAC--- 3'

Alw44I, SnoI, VneI

ApaORI

Acetobacter pasteurianus

5' CCWGG

5' ---CC

WGG--- 3'

ApeKI [48]

Aeropyrum pernix K1

5' GCWGC

5' ---G

CWGC--- 3'

ApiI

Arthrobacter picolinophilus

5' CTGCAG

5' ---CTGCA
3' ---G

ACGTC--- 5'

ApoI [49]

Arthrobacter protophormiae

5' RAATTY

5' ---R

AATTY--- 3'

ApyI

Arthrobacter pyridinolis

5' CCWGG

5' ---CC

WGG--- 3'

AquI

Agmenellum quadruplicatum PR-6

5' CYCGRG

5' ---C

YCGRG--- 3'

AscI [18][50]

Arthrobacter sp.

5' GGCGCGCC

5' ---GG

CGCGCC--- 3'

AseI [51]

Aquaspirillum serpens

5' ATTAAT

5' ---AT

TAAT--- 3'

AseII [51]

Aquaspirillum serpens

5' CCSGG

5' ---CC

SGG--- 3'

AsiI

Azotobacter sp.

5' GGATCC

5' ---G

GATCC--- 3'

ApaI

ApaLI

3' CAGAG
3' CACGTG
3' GTCNNNGAG
3' CGTCG

3' GRGCYC

3' GGANTCC
3' CHCGDG
3' GGWCC
3' AGGCCT
3' TCGCGA
3' ACGCGT
3' CYGCRG
3' CCCGGG
3' CGTN5ACG
3' CCTAGG
3' CACGTG
3' GGWCC
3' CGWCG
3' GACGTC
3' YTTAAR
3' GGWCC

3' GRGCYC

3' CCGCGCGG
3' TAATTA
3' GGSCC

3' CCTAGG

NNNN--- 3'

BcoDI, BscQII,

Alw26I [40]

3' ---CAGAGNNNNN
3' ---CACGT

--- 5'

TGCAC--- 3'
G--- 5'

CTG--- 3'

3' ---GTC

NNNGAC--- 5'

3' ---CGTCGN7NNNNN

3' ---GRGCY

C--- 5'

TNAGG--- 3'
CC--- 5'
C--- 3'

3' ---GGW

CC--- 5'
T--- 5'

3' ---TCG

CGA--- 5'

3' ---ACG

CGT--- 5'
CGYC--- 3'

3' ---CYGC
3' ---C

3' ---CGT

3' ---CCTAG
3' ---CACGT
3' ---GGW
3' ---CGWC

3' ---YTTAA
3' ---GGW

3' ---GRGCY

3' ---CCGCGC
3' ---TAAT
3' ---GGS

3' ---CCTAG

--- 5'

YCGRG--- 3'

3' ---GGANT

3' ---AGGCC

NNNN--- 3'

RG--- 5'
C--- 3'

CCGGG--- 5'
TGC--- 3'

NNNNNACG--- 5'
G--- 5'
G--- 5'

CC--- 5'
G--- 5'

G--- 3'

R--- 5'

CC--- 5'

C--- 5'

GG--- 5'

TA--- 5'

CC--- 5'

G--- 5'

BsmAI, BsoMAI, BstMAI

ApaLI, SnoI, VneI
CaiI
BbvI, BseKI, BseXI, Bsp423I,
Bst12I, Bst71I, BstV1I

AquI,
BmeT110I, BsiHKCI,
AvaI,
BsoBI, Eco88I, Nli3877I,
NspSAI

AxyI, Bse21I, Bsu36I, Eco81I,

Lmu60I, OxaNI, MstII, SauI,
SshAI
BmyI, BsoCI, Bsp1286I,
BspLS2I, MhlI, NspII, SduI

BseBI, BstNI, BstOI, Bst2UI,

EcoRII, MvaI, Sth117I, Taxi

AccIII, BbvAIII, BlfI, BseAI,

BsiMI, BspEI, CauB3I, Kpn2I,
MroI, PtaI

AcyI, AstWI, BbiII, BsaHI,

BstACI, Hin1I, HgiI, HgiGI,
Msp17I, PamII
Bsp120I, PpeI, PspOMI
BstAPI

AjnI, BstNI, BstOI, Bst1I, Bst2I,

Fsp1604I, MvaI, Psp6I, PspGI
AceI, SuiI, Taq52I, TseI
Asp713I, Bsp63I, CfrA4I, PaePI,
Pfl21I, Psp23I, PstI, SflI, Sst12I
AcsI CfaI, FsiI, XapI
BciBII, BptI, BseBI, BstNI,
BstOI, Bst2UI, Bst38I, Bst100I,
MvaI

BcoI,
BmeT110I,
BsmAI, BsoMAI, BsoBI, BstSI,
Eco27kI, OfoI
PalAI, SgsI

AsnI, BpoAI, PshBI, Sru4DI,

VspI
AhaI, AsuC2I, BcnI, CauII,
EcoHI, HgiS22I, Kpn49kII,
Mgl14481I, NciI

ApaCI, BamHI, BnaI, Bsp4009I,

BstI, OkrAI, Pfl8I, SurI,
Uba4009I

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5 of 8

Arthrobacter sp. A7359

5' ACCGGT

5' ---A

AsiSI

Arthrobacter sp.

5' GCGATCGC

5' ---GCGAT

AsnI [52]

Arthrobacter sp. N-CM

5' ATTAAT

5' ---AT

AspI [53]

Achromobacter sp. 699

5' GACNNNGTC

5' ---GACN

Asp700I [54]

Achromobacter sp. 700

5' GAAN4TTC

5' ---GAANN

NNTTC--- 3'

BbvAI, MroXI, PdmI, XmnI

Asp713I

Achromobacter sp. 713

5' CTGCAG

5' ---CTGCA
3' ---G

G--- 3'

ACGTC--- 5'

AjoI, AliAJI, BloHII, CfrA4I,

Ecl37kI, MhaAI, PstI, SflI,
Srl5DI, YenI

Asp718I [55]

Achromobacter sp. 718

5' GGTACC

5' ---G

GTACC--- 3'

Acc65I, AhaB8I, KpnI, SthI

Asp745I

Achromobacter sp. 745

5' GGWCC

5' ---G

GWCC--- 3'

Bme18I, BsrAI, CauI, Eco47I,

ErpI, FdiI, SinI, VpaK11AI,
VpaK11BI

AspAI

Alcaligenes sp.

5' GGTNACC

5' ---G

GTNACC--- 3'

AspA2I

Arthrobacter sp. A2

5' CCTAGG

5' ---C

CTAGG--- 3'

AspEI [56]

Aureobacterium sp.

5' GACN5GTC

5' ---GACNNN
3' ---CTGNN

NNNCAG--- 5'

Achromobacter sp. H

5' GWGCWC

5' ---GWGCW
3' ---C

C--- 3'

WCGWG--- 5'

Asp10HI

Acidiphilium sp. 10H

5' TTCGAA

5' ---TT

CGAA--- 3'

Asp10HII

Acidiphilium sp. 10H

5' CCAN5TGG

5' ---CCANNNN

Asp26HI

Acidiphilium sp. 26H

5' GAATGC

5' ---GAATGCN

Asp27HI

Acidiphilium sp. 27H

5' GAATGC

5' ---GAATGCN

Asp35HI

Acidiphilium sp. 35H

5' GAATGC

5' ---GAATGCN

Asp36HI

Acidiphilium sp. 36H

5' GAATGC

5' ---GAATGCN

Asp40HI

Acidiphilium sp. 40H

5' GAATGC

5' ---GAATGCN

Asp50HI

Acidiphilium sp. 50H

5' GAATGC

5' ---GAATGCN

AspLEI

Arthrobacter sp. LE3860

5' GCGC

5' ---GCG

AspMI

Acinetobacter sp. M

5' AGGCCT

5' ---AGG

AspMDI

Alcaligenes sp. MD1

5' GATC

5' ---

AspNI

Anabaena sp. J3

5' GGNNCC

5' ---GGN

AspS9I

Arthrobacter sp. S9

5' GGNCC

5' ---G

AssI

Arthrobacter sp.

5' AGTACT

5' ---AGT

AstWI

Anabaena sp.

5' GRCGYC

5' ---GR

AspHI

[57]

3' TGGCCA
3' CGCTAGCG
3' TAATTA
3' CTGNNNCAG
3' CTTN4AAG
3' GACGTC
3' CCATGG
3' CCWGG
3' CCANTGG
3' GGATCC
3' CTGN5CAG

3' CWCGWG

3' AAGCTT
3' GGTN5ACC
3' CTTACG
3' CTTACG
3' CTTACG
3' CTTACG
3' CTTACG
3' CTTACG
3' CGCG
3' TCCGGA
3' CTAG
3' CCNNGG
3' CCNGG

3' TCATGA

3' CYGCRG

CCGGT--- 3'

AgeI, AsiGI, BshTI, CsiAI,

CspAI, PinAI

AsiAI

3' ---TGGCC

A--- 5'

CGC--- 3'

3' ---CGC

TAGCG--- 5'
TAAT--- 3'

3' ---TAAT

TA--- 5'
NNGTC--- 3'

3' ---CTGNN

NCAG--- 5'

3' ---CTTNN

NNAAG--- 5'

3' ---CCATG

G--- 5'

3' ---CCWG

G--- 5'

3' ---CCANTG

G--- 5'

3' ---GGATC

C--- 5'

NNGTC--- 3'

3' ---AAGC

TT--- 5'

3' ---GGTN

3' ---CTTAC
3' ---CTTAC
3' ---CTTAC
3' ---CTTAC
3' ---CTTAC
3' ---CTTAC
3' ---C

3' ---TCC
3' ---CTAG
3' ---CCN
3' ---CCNG

3' ---TCA

3' ---CYGC

NTGG--- 3'

NNNNACC--- 5'
--- 3'

GN--- 5'
--- 3'

GN--- 5'
--- 3'

GN--- 5'
--- 3'

GN--- 5'
--- 3'

GN--- 5'
--- 3'

GN--- 5'
C--- 3'

GCG--- 5'
CCT--- 3'
GGA--- 5'
GATC--- 3'
--- 5'

NCC--- 3'
NGG--- 5'
GNCC--- 3'
G--- 5'

ACT--- 3'
TGA--- 5'
CGYC--- 3'
RG--- 5'

RgaI, SfaAI, SgfI

AseI, BpoAI, PshBI, Sru4DI,
VspI
AtsI, PflFI, PsyI, TelI, Tth111I

AcrII, Bse64I, BseT10I, BstEII,

BstPI, Eco91I, EcoO65I, PspEI
AvrBII, AvrII, BlnI, BspA2I,
XmaJI

AhdI, BmeRI, BspOVI, DriI,

Eam1105I, EclHKI, NruGI
Alw21I, Bbv12I, Bsh45I,
BsiHKAI,
HgiAI, MspV281I
Bsm6I,

AsuII, BspT104I, BstBI, CbiI,

Csp68KII, PlaII, PpaAI, Ssp1I

AccB7I, AcpII, BasI, Esp1396I,

PflBI, PflMI, Van91I
Asp27HI, Asp35HI, Asp36HI,
BsaMI, BscCI, BsmI, PctI

Asp35HI, Asp36HI, Asp40HI,

BmaHI, BsaMI, BscCI, BsmI

Asp36HI, Asp40HI, Asp50HI,

BsaMI, BscCI, BsmI, Mva1269I
Asp40HI, Asp50HI, BmaHI,
BscCI, BsmI, Mva1269I, PctI

Asp27HI, Asp36HI, Asp50HI,

BsaMI, BscCI, BsmI, Mva1269I
Asp26HI, Asp35HI, Asp36HI,
BsaMI, BscCI, BsmI, Mva1269I

BspLAI, BstHHI, CfoI, FnuDIII,

HhaI, Hin6I, HinP1I, HsoI,
HspAI, SciNI
AatI, Eco147I, GdiI, PceI, SarI,
Sru30DI, SseBI, SteI, StuI

BfuCI, Bsp143I, BstMBI, DpnII,

Kzo9I, MboI, NdeII, Sau3AI
BmiI,

BscBI, BspLI, NlaIV,

PspN4I

AsuI, AvcI, Bac36I, Bal228I,

FmuI, NspIV, PspPI, Sau96I

BmcAI,
DpaI,
Bpa34I,
Eco255I, RflFII, ScaI, ZrmI
Acc113I,

AcyI, AsuIII, BsaHI, BstACI,

Hin1I, HgiI, HgiDI, HgiGI,

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6 of 8

Msp17I
AsuI [58]

Anabaena subcylindrica

5' GGNCC

5' ---G

AsuII [59]

Anabaena subcylindrica

5' TTCGAA

5' ---TT

CGAA--- 3'

AsuIII

Anabaena subcylindrica

5' GRCGYC

5' ---GR

CGYC--- 3'

AsuC2I

Actinobacillus suis C2

5' CCSGG

5' ---CC

SGG--- 3'

AsuHPI [60]

Actinobacillus suis HP

5' GGTGA

5' ---GGTGAN6NN

AsuNHI [60]

Actinobacillus suis NH

5' GCTAGC

5' ---G

AtsI

Aureobacterium testaceum 4842

5' GACNNNGTC

5' ---GACN

Anabaena variabilis

5' CYCGRG

5' ---C

YCGRG--- 3'

Anabaena variabilis

5' GGWCC

5' ---G

GWCC--- 3'

AvcI

Actinomyces violaceoniger
cristalomycini

5' GGNCC

5' ---G

GNCC--- 3'

AviII

Anabaena variabillis (halle)

5' TGCGCA

5' ---TGC

AvrII [18][26]

Anabaena variabilis UW

5' CCTAGG

5' ---C

CTAGG--- 3'

AvrBII

Arthrobacter variabilis

5' CCTAGG

5' ---C

CTAGG--- 3'

AxyI [63]

Acetobacter xylinus

5' CCTNAGG

5' ---CC

AvaI

[10][61][62]

AvaII [8][10]
[39][61][62]

3' CCNGG

3' AAGCTT

3' CYGCRG

3' GGSCC
3' CCACT

3' CGATCG

3' CTGNNNCAG
3' GRGCYC
3' CCWGG

3' CCNGG
3' ACGCGT
3' GGATCC
3' GGATCC
3' GGANTCC

3' ---CCNG

GNCC--- 3'
G--- 5'

3' ---AAGC

TT--- 5'

3' ---CYGC

RG--- 5'

3' ---GGS

CC--- 5'

3' ---CCACTN6N

3' ---CGATC

3' ---CTGNN
3' ---GRGCY
3' ---CCWG

3' ---CCNG
3' ---ACG
3' ---GGATC
3' ---GGATC
3' ---GGANT

--- 3'

N--- 5'

CTAGC--- 3'
G--- 5'

NNGTC--- 3'
NCAG--- 5'
C--- 5'

G--- 5'

G--- 5'

GCA--- 3'
CGT--- 5'
C--- 5'
C--- 5'

TNAGG--- 3'
CC--- 5'

AspS9I, AvcI, CcuI, Cfr13I,

FmuI, MaeK81II, Nsp7121I,
PspPI, UnbI

AcpI, Bpu14I, Bsp119I,

BspT104I, Csp45I, FspII, LspI,
NspV, SfuI

AcyI, AsuIII, BbiII, BsaHI,

BstACI, Hin1I, HgiHII, Hsp92I,
Msp17I
AhaI, AseII, BcnI, Eco1831I,
EcoHI, Kpn49kII, Mgl14481I,
NciI
HphI, SspD5I
AceII,
BspOI,
LlaG2I,
BmtI,
NheI, PstNHI
AspI, PflFI, PsyI, TelI, Tth111I
AquI, Ama87I, BsiHKCI, BsoBI,
BspLU4I, Eco88I, NspIII, PlaAI
Bme18I, Bme216I, BsrAI,
Eco47I, Kzo49I, Psp03I, SmuEI,
VpaK11AI
AspS9I, BshKI, BsiZI,
Bsp1894I, BspBII, BspF4I,
Bsu54I, Pde12I

Acc16I, AosI, FdiII, FspI, MstI,

NsbI, PamI, Pun14627I
AspA2I, AvrBII, BlnI, BspA2I,
XmaJI
AspA2I, AvrII, BlnI, BspA2I,
XmaJI

AocI, BliHKI, Bse21I, BspR7I,

Bsu36I, CvnI, Eco81I, Lmu60I

Current list/Article: Top Whole list navigation

Notes
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J, Hornby DP, Janulaitis A, Jeltsch A, Josephsen J, Kiss A, Klaenhammer TR, Kobayashi I, Kong H, Krger DH, Lacks S, Marinus MG, Miyahara M, Morgan RD, Murray NE, Nagaraja V,
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