1

Andrs Moya
Publications

Complete Books

1. Fontdevila A & Moya A. (2003). Evolucin. Origen, adaptacin y divergencia de la

2. especies. Editorial Sntesis, Madrid, Spain.
3. Fontdevila A & Moya A. (1999). Introduccin a la Gentica de Poblaciones. Editorial
Sntesis, Madrid, Spain.
4. Moya A. (1989). Sobre la estructura de la teora de la evolucin. Editorial Anthropos,
Barcelona, Spain.
5. Moya A. (1988). Ensayos heterogneos sobre biologa y evolucin. Servicio de
Publicaciones de la Universitat de Valncia, Valncia, Spain.
6. Moya A. (1983). Anlisis y crtica de la axiomatizacin de la Biologa de J.H.
Woodger. Publicaciones de Bioestadstica y Biomatemtica No. 8. Publicaciones y
Ediciones de la Universidad de Barcelona, Barcelona, Spain.

Book Chapters

1. Gabaldn T, Gil R, Peret J, Latorre A & Moya A. (2008). The core of a minimal
gene set: insights from natural reduced genomes. In Protocells: Bridging nonliving
and living matter. (Eds. S. Rasmussen, M.A. Bedau, L. Chen, D. Deamer, D.C.
Krakauer, N.H. Packard & P.F. Stadler). The MIT Press. Boston, USA.
2. Moya A, Tamames J & Latorre A. (2008). Genmica y metagenmica: aproximacin
a la biodiversidad microbiana. En Biodiversidad, pp. 81-88. Presidencia de la
Generalitat Valenciana, Fundacin Premios Rey Jaime I. Valencia, Spain.
3. Moya A. (2008). Lo que somos visto bajo la peligrosa idea de Darwin. En El impacto
de la ciencia en la sociedad. (Ed. E. Punset). Pp. 60-69. Fundacin Banco de
Santander. Madrid, Spain.
4. Moya A. (2008). Introduccin al libro Experimentos sobre hbridos en plantas de
Gregor Mendel. Pp. 9-19. KRK ediciones. Oviedo, Spain.
5. Moya A & Latorre A. (2008). Lessons in evolution from genome reduction in
endosymbionts. In Horizontal gene transfer in the evolution of pathogenesis. (Ed. M
Hensel & H Schmidt). pp. 317-334. Cambridge University Press, Cambridge, UK.
6. Moya A. (2007). Variabilidad gentica del virus de la hepatitis C: el brote epidmico
de la ciudad de Valencia. En Los virus y nosotros. (Ed. S Grisola, J Garca de Lomas
& E Bendala-Tufanisco). pp- 11-20. Fundacin Valenciana de Estudios Avanzados,
Valencia, Spain.
7. Silva FJ, Latorre A, Gmez-Valero & Moya A. (2007). Genomic changes in bactria:
from free-living to endosymbiotic life. In Structural approaches to sequence
evolution: molecules, networks, populations. (Ed. U Bastolla, M Porto, HE Roman & M
Vendruscolo). pp 151-167. Springer-Verlag, New York, USA.
8. Latorre A & Moya A. (2006). Comparative genomics in Buchnera aphidicola, primary
endosymbiont of aphids. In Insect Symbiosis, vol. 2. (Ed. K Bourtzis & TA Millar). pp.
157-174. CRC Press, Boca Raton, USA.
9. Gil R, Prez-Brocal V, Latorre A & Moya A. (2006). Minimal genomes required for
life. In Prokaryotic diversity: mechanisms and significance. (Ed. NA Logan, HM
Lappin-Scott & PCF Oyston). pp. 105-121. Cambridge University Press, Cambridge,
UK.
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10. Moya A. (2005). Prologue to the book of Adolf Tobea Mrtires mortferos.
Coleccin Sin Fronteras. Publicaciones de la Universitat de Valncia, Valencia, Spain.
11. van Ham RCHJ, Moya A & Latorre A. (2004). Evolution of endosymbiosis in insects.
In Evolution: From molecules to ecosystems. (Ed. A Moya & E Font). pp. 94-105.
Oxford University Press, Oxford, UK.
12. Moya A. (2003). Controversias en torno a la teora de la evolucin biolgica. En
Cincuenta aos de ADN. (Ed. P Garca Barreno). pp. 399-435. Editorial Espasa Calpe,
Madrid, Spain.
13. Garca-Martnez J, Raga JA, Moya A & Latorre A. (2002). Mitochondrial DNA
variability of striped dolphins in European waters. In Molecular and Cell Biology of
Marine Mammals. (Ed. CJ Pfeiffer). pp. 21-33. Krieger Publishing Co., Malabar,
Florida. USA.
14. Silva FJ, Latorre A & Moya A. (2001). Cmo ha llegado a ser tan pequeo el
genoma de Buchnera, la bacteria endosimbionte de los pulgones?. En Actas de las II
Jornadas de Bioinformtica. (Ed. JM Carazo, A Rodrguez Moreno, G Thode & O
Trelles). pp. 76-79. Universidad de Mlaga, Mlaga, Spain.
15. Gonzlez Candelas F, Bracho A & Moya A. (2001). Relaciones filogenticas entre
virus de RNA y la razn de verosimilitudes en el anlisis forense: necesidad de
nuevos desarrollos bioinformticos. En Actas de las II Jornadas de Bioinformtica.
(Ed. JM Carazo, A Rodrguez Moreno, G Thode & O Trelles). pp. 140-147. Universidad
de Mlaga, Mlaga, Spain.
16. Moya A & F Gonzlez Candelas. (2000). La bioinformtica y la conservacin de los
recursos genticos. En Recursos genticos en mejora vegetal. (Ed. F Nez & JM
Carrillo). pp. 295-333. Editorial de la Universidad Politcnica de Valencia, Valencia,
Spain.
17. Moya A, Fars MA & Barrio E. (2000). Una tesis en defensa de la gentica de
poblaciones: la evolucin de los virus de RNA. En Del ADN a la Humanidad.
Homenaje al Profesor Francisco Jos Ayala. (Ed. L Borges). pp. 111-122. Coleccin
Eslabones en el desarrollo de la Ciencia. Universistat de Les Illes Balears (Spain) y
Centro de Estudios Filosficos, Polticos y Sociales Vicente Lombardo Toledano
(Mxico).
18. Moya A, Elena SF, Bracho A, Miralles R & Barrio E. (2000). The evolution of RNA
viruses: A population genetics view. In Variation and evolution in plants and
microorganisms: Towards a new synthesis fifty years after Sttebins. (Ed. FJ Ayala &
WM Fitch). pp. 61-82. National Academy Press. Washington. USA.
19. Moya A, Gonzlez Candelas F & Bracho A. (1999). La variabilidad gentica de los
virus de RNA como problema en patologa: el caso del virus C de la hepatitis. In
Actividades Cientficas de la Real Academia de Medicina de la Comunidad Valenciana.
pp. 235-245. Valencia, Spain.
20. Moya A. (1999). Ciencia sobre ciencia. Prologue to the book Argumentos
recombinantes. Sobre cultivos y alimentos transgnicos de J Riechmann. pp. 7-9. Los
libros de la Catarata. Madrid, Spain.
21. Moya A. (1998). La multidimensionalidad de la teora de la Evolucin. En
Proceedings of the Meeting on Evolutionism and Rationalism. (Ed. E Molina, A
Carreras & J Puertas). pp. 279-288. Servicio de Publicaciones de la Universidad de
Zaragoza, Zaragoza, Spain.
22. Moya A. (1996). RNA viruses as model systems for testing the Population Genetics
view of Evolution. En First International Conference on Philosophy of Biology. (Ed. J
Tojo Surez). pp. 207-218. Universidade de Vigo, Pontevedra, Spain.
23. Moya A. (1996). La gnesis de la complejidad biolgica. En Evolucin: aspectos
interdisciplinares. (Ed. E Molina). pp. 111-122. Seminario Interdisciplinar de la
Universidad de Zaragoza. Mira Ediciones. Zaragoza, Spain.
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24. Moya A & Garca Arenal F. (1995). Population genetics of viruses: an introduction. In
Molecular Basis of Virus Evolution. (Ed. A Gibbs, H Calisher & F Garca-Arenal). pp.
213-223. Cambridge University Press. Cambridge, UK.
25. Moya A, Domingo E & Holland JJ (1995). RNA viruses: a bridge between life and
artificial life. In Articial Life. (Ed. F Morn, A Moreno, JJ Merelo & P Chacn). pp. 170-
178. Springer-Verlag, Berlin, Germany.
26. Galiana A, Moya A & Ayala FJ (1995). The founder effect in speciation: Drosophila
pseudoobscura as a model case. In Genetics of Natural Populations: the continuing
importance of Theodosius Dobzhansky. (Ed L Levine). pp. 281-297. Columbia
University Press, New York, USA.
27. Moya A. (1994). La gnesis evolutiva de la existencia y la esencia. En Descifrar la
vida: Ensayos de Historia de la Biologa. (Ed. J Casadess & F Ruiz Berraquero). pp.
323-336. Publicaciones de la Universidad de Sevilla, Spain.
28. Elena SF, Marcos JF, Dopazo J, Flores R & Moya A. (1994). Las secuencias de los
viroides muestran correlacin intramolecular y tienen la capacidad de formar
pseudonudos y tetralazos. En Biologa Computacional. (Ed. A Moya). pp. 163-175.
Publicaciones de la Universitat de Valencia, Valencia, Spain.
29. Buades C & Moya A. (1994). Anlisis filogentico de un fenmeno de transferencia
horizontal: la isopenicilina-N-sintetasa. En Biologa Computacional. (Ed. A Moya). pp.
149-161. Publicaciones de la Universitat de Valencia, Valencia, Spain.
30. Moya A & Galiana A. (1991). Effect of succesive bottlenecks of different sizes on the
evolution of positive assortative mating in Drosophila. In The Reference Points in
Evolution. (Ed. P Alberch & GA Dover). pp. 92-95. Fundacin Juan March, Serie
Universitaria 255, Madrid, Spain.
31. Domingo E, Mateu MG, Martnez MA, Dopazo J, Moya A & Sobrino F. (1990). Genetic
variability and antigenic diversity of foot-and-mouth disease virus. In Applied Virology
Research. Vol. II. (Ed. E Kurstak, RG Marusyk, FA Murphy & MHV van Regenmortel).
Pp. 233-266. Plenum Press, New York, USA.
32. Martnez D, Moya A, Fereres A & Latorre A. (1990). Mitochondrial DNA variability in
spanish populations of two aphid species. In Aphid-Plant Interactions: Population to
Molecules. (Ed. DC Peters & JA Webster). pp. 286. North-Holland, New York, USA.
33. Moya A. (1990). La estructura de la teora de la evolucin. En Azar, caos e
indeterminismo. (Ed. A Carreras, JL Escorihuela & A Requejo). pp. 141-150. Prensas
Universitarias de Zaragoza, Zaragoza, Spain.
34. Moya A. (1990). El origen del hombre y la teora neutral de la evolucin molecular.
En Azar, caos e indeterminismo. (Ed. A Carreras, JL Escorihuela & A Requejo). pp.
121-140. Prensas Universitarias de Zaragoza, Zaragoza, Spain.
35. Galiana A, Ayala FJ & Moya A. (1989). Flush-crash experiment in Drosophila. In
Transient Unstable Populations. (Ed. A Fontdevila). pp. 58-73. Springer-Verlag,
Berlin, Alemania.
36. Dopazo J, Sobrino F, Domingo E & Moya A. (1988). Polymorphism and evolution of
the VP1 protein gene of foot-and-mouth disease virus. In Classification and Related
Methods of Data Analysis. (Ed. HH Bock). pp. 349-354. North-Holland, Amsterdam,
Holland.
37. Moya A. (1986). Aproximaciones formales a la estructura de la Biologa Evolutiva. En
La Sociedad Naturalizada. Gentica y Conducta. (Ed. J Sanmartn, V Simn & ML
Garca-Merita). Pp. 87-104. Tirant Ediciones, Valencia, Spain.
38. Botella LM, Castro JA, Gonzlez-Candelas F, Mnsua JL & Moya A. (1986). Una
estrategia evolutiva en los procesos de competencia: la parada larvaria. En La
Sociedad Naturalizada: Gentica y Conducta. (Ed. J Sanmartn, V Simn & JL Garca-
Merita). pp. 407-420. Tirant Ediciones, Valencia, Spain.
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39. Moya A. (1985). Metrizacin en biologa de poblaciones. En Actas del II Congreso de

Teora y Metodologa de las Ciencias. (Ed. A Hidalgo & J Velarde Lombraa). pp. 337-
341. Pentalfa, Oviedo, Spain.
40. Moya A. (1985). Biologa terica y matematizacin de la biologa. En Actas del II
Congreso de Teora y Metodologa de las Ciencias. (Ed. A Hidalgo Tun & J Velarde
Lombraa). pp. 333-335. Pentalfa, Oviedo, Spain.

Book and Journal Editor

1. Moya A. (2009). 150 Aniversario de La publicacin de El origen de ls espcies y 200
del nacimiento de Charles Darwin. Teorema XXVIII.
2. Moya A & Peret J. (2007). El desvn de la evolucin. Escritos seleccionados de
Franois Jacob. Publicaciones de la Universitat de Valncia, Valncia, Spain.
3. Latorre A & Moya A. (2006). La evolucin de un evolucionista. Escritos seleccionados
de Francisco J. Ayala. Publicaciones de la Universitat de Valncia, Valncia, Spain.
4. Moya A & Font E. (2004). Evolution: from molecules to ecosystems. Oxford University
Press, Oxford, UK.
5. Moya A. (1994). Biologa Computacional. 299 pp. Publicaciones de la Universitat de
Valncia. Valncia, Spain.

Book Reviews
1. Moya A. (2008). Una revisin del libro Por qu es nica la biologa de Ernst Mayr.
Mi+d www.madrimasd.org/cienciaysociedad/resenas/ensayo/default.asp
2. Moya A. (2008). La ley de Hamilton. Una revisin de Qu es altruismo de Alan
Dugatkin. Mtode 60, 108.
3. Moya A. (2008). Ciencia, evolucin y creacionismo. Una revisin de Darwin y el
diseo inteligente y Darwins gift to Science and Religion de Francisco J. Ayala.
Revista de Libros 141, 6-7.
4. Moya A. (2008). Una teora cientfica en plena forma. Una revisin de Los retos
actuales del darwinismo de Juan Moreno. Revista de la Sociedad Espaola de
Bioqumica y Biologa Molecular 158, 41.
5. Moya A. (2008). Los retos actuales del darwinismo. Una revisin de Los retos
actuales del darwinismo de Juan Moreno. Evolucin 3, 95-97.
6. Moya A. (2008). Desbrozando lo inefable. Una revisin de Nihilismo y supervivencia
de Carlos Castrodeza. Pasajes de Pensamiento Contemporneo 26, 101-104.
7. Moya A. (2007). Dios y la biologa. Una revisin de El gen de Dios de Dean Hamer.
Revista de Libros 129, 14-15.
8. Moya A. (2007). Vindicacin de una historia universal del evolucionismo. Una
revisin de Evolucin: la asombrosa historia de una teora cientfica de Edgard J
Larson. Revista de Libros 127-128, 29-30.
9. Moya A. (2007). Pasin por la biologa. Una revisin de Porqu es nica la biologa
de Ernst Mayr. Revista de Libros 125, 7.
10. Moya A. (2006). Lo humano en toda su dimensin. Una revisin de La naturaleza
humana de Jess Mostern. Mtode: Revista de Difusin de la Investigacin 50, 127.
11. Moya A. (2005). Dumbo ya est maduro. Una revisin de La evolucin de la libertad
de Daniel C Dennett. Revista de Libros 103-104, 33-34.
12. Moya A. (2004). La biologa de la ontologa y la tica. Una revisin de Los lmites de
la historia natural y Hacia una nueva biologa del conocimiento de Carlos Castrodeza.
Revista de Libros 87, 33.
13. Moya A. (2003). La importancia de la palabra ausente. Una revisin de
Deconstruyendo a Darwin de Javier Sampedro. Boletn de la Sociedad Espaola de
Gentica 17, 10-13.
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14. Moya A. (2002). Dos filosofas sobre evolucin biolgica. Una revisin de El enigma
de la esfinge de Juan Luis Arsuaga y Senderos de evolucin humana de Camilo Jos
Jos Cela y Franciso J Ayala. Pasajes de Pensamiento Contemporneo 8, 139-143.
15. Moya A. (2002). Ciencia y destreza de la vida. Una revisin de Ciencia Viva:
Reflexiones sobre la aventura intelectual de nuestro tiempo de Jess Mostern.
Mtode: Revista de Difusin de la Investigacin 33, 75.
16. Moya A. (2001). The quantitative-genetic analysis of thought: a risky proposal. Una
revisin de Razn Biolgica. La base evolucionista del pensamiento by Carlos
Castrodeza. Biology and Philosophy 16, 415-422.
17. Moya A. (2000). El anlisis gentico-cuantitativo del pensamiento: una propuesta
arriesgada. Una revisin de Razn Biolgica. La base evolucionista del pensamiento
de Carlos Castrodeza. Pasajes de Pensamiento Contemporneo 4, 110-115.
18. Moya A. (2000). La lgica, y otras cosas, de seis divinos chiflados. Una revisin de
Los lgicos de Jess Mostern. Mtode: Revista de Difusin de la Investigacin 27,
64-65.
19. Moya A. (2000). Caos y orden: disponemos de una teora unificada de la realidad?
Una revisin de Caos y orden de Antonio Escohotado. Mtode: Revista de Difusin de
la Investigacin 25, 56.
20. Moya A. (1999). La rebelin contra la ciencia en el final del siglo XX. Una revisin de
Einstein, historia y otras pasiones. La rebelin contra la Ciencia de Gerald Holton.
Pasajes de Pensamiento Contemporneo 1, 75-77.
21. Moya A. (1999). Los detractores de la Ciencia. Una revisin de Einstein, historia y
otras pasiones. La rebelin contra la ciencia en el final del siglo XX de Gerald Holton.
Mtode: Revista de Difusin de la Investigacin 22, 52.
22. Moya A. (1999). La biotecnologa. Una revisin de Genes en el laboratorio y en la
fbrica, Editado por Ana Durn y Jorge Riechmann. Revista de Libros 29, 26-27.
23. Moya A. (1999). En torno al reduccionismo en biologa. Una revisin de Genetic
Engineering Dream or Nightmare?. The Brave New World of Bad Science and Big
Business de M-W Ho. Revista de Libros 29, 27.
24. Moya A. (1999). De Dolores y derechos compartidos: la polmica en torno al
derecho de los animales. Una revisin de Vivan los animales! de Jess Mostern.
Mtode: Revista de Difusin de la Investigacin 23, 56-57.
25. Moya A. (1992). Una revisin de Mente y matera de Max Delbrck. Ensayo de
epistemologa evolutiva. Arbor CXLIII, 167-168.
26. Moya A. (1988). Una revisin deThe Structure of Biological Science de Alexander
Rosenberg. Anthropos 82-83, XV-XVI.
27. Moya A. (1988). Una revisin de The Nature of Selection de Elliot Sober. Anthropos
82-83, XVI-XVII.

Reviews
1. Moya A, Gil R & Latorre A. (2009). The evolutionary history of symbiotic association
among bacteria and its animal host: a model Clinical Microbiology and Infection 15
Suppl. 1, 11-13.
2. Moya A, Gil R, Latorre A, Pereto J, Garcilln-Barcia F & de la Cruz F. (2009).
Towards minimal bacterial cells: evolution versus design. FEMS Microbiology Reviews
33, 225-235.
3. Tagu D, Klingler JP, Moya A & Simon JC (2008). Early progress in aphid genomics
and consequences for plant-aphid interaction studies. Molecular Plant-Microbe
Interactions 21, 701-708.
4. Moya A, Peret J, Gil R & Latorre A. (2008). Learning how to live together: genomic
insights into prokaryote-animal symbioses. Nature Reviews Genetics 9, 218-229.
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5. Latorre A, Gil R, Silva FJ & Moya A. (2005). Chromosomal stasis versus plasmid
plasticity in aphid endosymbiont Buchnera aphidicola. Heredity 95, 339-347.
2. Gonzlez-Candelas F & Moya A. (2005). Time and rate of evolution are the key to
establish transmission cases. AIDS 19, 1552-1553.
3. Moya A, Holmes EC & Gonzlez-Candelas F. (2004). The population genetics and
evolutionary epidemiology of RNA viruses. Nature Reviews Microbiology 2, 279-288.
4. Gil R, Silva FJ, Peret J & Moya A. (2004). Determination of the core of a minimal
bacterial gene set. Microbiology and Molecular Biology Reviews 68, 518-537.
5. Gil R, Latorre A & Moya A. (2004). Bacterial endosymbionts of insects: insights from
comparative genomics. Environmental Microbiology 6, 1109-1122.
6. Fares MA, Moya A & Barrio E. (2004). GroEL and the maintenance of bacterial
endosymbiosis. Trends in Genetics 20, 413-416.
7. Silva FJ, Latorre A & Moya A. (2003). Why are the genomes of endosymbiotic
bacteria so stable? Trends in Genetics 19, 176-180.
8. Latorre A, Gil R, Silva FJ, Martnez-Torres D & Moya A. (2003). Tempo and mode of
Genomic reduction in endosymbiotic bacteria of insects: the case of Buchnera
aphidicola. Symbiosis 34, 301-316.
9. Holmes EC & Moya A. (2002). Is the quasispecies concept relevant to RNA viruses?
Journal of Virology 76, 460-462.
10. Sabater B, van Ham RCHJ, Martnez-Torres D, Silva FJ, Latorre A & Moya A. (2001).
Molecular evolution of aphids and their primary (Buchnera sp.) and secondary
endosymbionts: implications for the role of symbiosis in insect evolution. Interciencia
26, 508-512.
11. Moya A, Elena SF, Bracho A, Miralles R & Barrio E. (2000). The evolution of RNA
viruses: A population genetics view. Proceedings of the National Academy Sciences
USA 97, 6967-6973.
12. Elena SF, Miralles R, Cuevas JM, Turner PE & Moya A. (2000). The two faces of
mutation: extinction and adaptation in RNA viruses. IUBMB Life 49, 1-5.
13. Buades C., Michelena JM, Latorre A & Moya A. (1999). Accelerated evolution in
bacterial endosymbionts of aphids. International Microbiology 2, 11-14.
14. Moya A & Peret J (1998). Pere Alberch (1954-1998). The passion for understanding
evolution and development. International Microbiology 1, 159-160.
15. Moya A. (1998). The evolution of cichlid fishes or how to survive in Africa. Journal of
Evolutionary Biology 11, 263-264.
16. Fars MA, Barrio E, Becerra N, Escarms C, Domingo E & Moya A. (1998). The foot-
and-mouth disease RNA virus (FMDV) as a model in experimental phylogenetics.
International Microbiology 1, 313-320.
17. Domingo E, Escarmis C, Sevilla N, Moya A, Elena SF, Quer J, Novella IS & Holland
JJ. (1996). Basic concepts in RNA virus evolution. FASEB Journal 10, 859-864.
18. Duarte EA, Novella IS, Weaver SC, Domingo E, Wain-Hobson S, Clarke DK, Moya A.,
Elena SF, de la Torre JC & Holland JJ (1994). RNA virus quasispecies: significance for
viral disease and epidemiology. Infectious Agents and Disease 3, 201-214.

Journal Articles
1. Cuevas JM, Torres-Puente M, Jmenez-Hernndez N, Bracho AM, Garca-Robles I,
Carnicer F, del Olmo J, Ortega E, Gonzlez-Candelas F & Moya A. (2009). Combined
therapy of interferon plus ribavirin promotes multiple adaptive solutions in hepatitis C
virus. Journal of Medical Virology 81, 650-656.
2. Pignatelli M, Serras F, Moya A, Guig R & Corominas M. (2009). CROC: Finding
chromosomal clusters in eukaryotic genomes. Bioinformatics 25, 1552-1553.
3. Pignatelli M, Moya A & Tamames J. (2009). envDB reveals environmental
distribution of prokaryotic taxa. Environmental Microbiology Reports 1, 191-197.
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4. Loureno V, Moya A, Gonzlez-Candelas F, Carbone I, Maffia LA & Mizubuti E.

(2009). Molecular diversity and evolutionary processes of Alternaria solani in Brazil
inferred using genealogical and coalescent approaches. Phytopathology 99, 765-774.
5. Llorens C, Futami R, Renaud G & Moya A. (2009). Bioinformatic pipeline and
database to investigate the origin and diversity of clan peptidases. Biology Direct 4,
3.
6. Cuevas JM, Gonzlez-Candelas F, Moya A & Sanjun R (2009) The effect of ribavirin
on the mutation rate and spectrum of Hepatitis C virus in vivo. Journal of Virology
83, 5760-5764.
7. Pignatelli M, Aparicio G, Blanquer I, Hernndez V & Moya A. (2008) Metagenomics
reveals our incomplete knowledge of global biodiversity. Bioinformatics 24, 2124-
2125.
8. Lpez-Snchez MJ, Neef A, Patio-Navarrete R, Navarro L, Jimnez R, Latorre A &
Moya A. (2008). Blattabacteria, the endosymbionts of cockroaches, have small
genome sizes and high genome copy number. Environmental Microbiology 10, 3417-
3422.
9. Llorns C, Fares MA & Moya A. (2008). Relationships of gag-pol diversit between
Ty3/Gypsy and retroviridae LTR retroelements and the three kings hypothesis. BMC
Evolutionary Biology 8, 276.
10. Anselme C, Prez-Brocal V, Vallier A, Vincent-Monegat C, Charif D, Latorre A, Moya
A & Heddi A. (2008). Identification of the weevil immune genes and their expression
in the bacteriome tissue. BMC Biology 6, 43.
11. Llorns C, Fares MA & Moya A. (2008). Relationships of gag-pol diversity between
Ty3/Gypsy and retroviridae LTR retroelements and the three kings hypothesis. BMC
Evolutionary Biology 8, 276.
12. Gosalbes MJ, Lamelas A, Moya A & Latorre A. (2008). The striking case of
tryptophan provision in the cedar aphid Cinara cedri. Journal of Bacteriology 190,
6026-6029.
13. Lpez-Labrador FX, Moya A & Gonzlez-Candelas. (2008). Mapping natural
polymorphisms of hepatitis C virus NS3/4A protease ans antiviral resistance to
inhibitors in Worldwide isolates. Antiviral Therapy 13, 481-494.
14. Sentandreu V, Jimnez-Hernndez N, Torres-Puente M, Bracho MA, Valero A,
Gosalbes MJ, Ortega E, Moya A & Gonzlez-Candelas F. (2008). Evidence of
recombination in intrapatiend populations of hepatitis C. PLoS One 3, e3239.
15. Cuevas JM, Torres-Puente M, Jimnez-Hernndez N, Bracho MA, Garca-Robles I,
Wrobel B, Carnicer F, del Olmo F, Ortega E, Moya A & Gonzlez-Candelas. (2008).
Genetic variability of hepatitis C before and after combined therapy of interferon plus
ribavirin. PLoS One 3, e3058.
16. Cuevas JM, Torres-Puente M, Jimnez-Hernndez N, Bracho MA, Garca-Robles I,
Wrobel B, Carnicer F, del Olmo F, Ortega E, Moya A & Gonzlez-Candelas. (2008).
Refined analysis of genetic variability parameters in hepatitis C virus and the ability
to predict antiviral treatment responde. Journal of Viral Hepatitis 15, 578-590.
17. Carrillo FYE, Sanjun R, Moya A & Cuevas JM. (2008). Enhanced adaptation of
vesicular stomatitis virus in cell infected with vaccinia virus. Infection, Genetics and
Evolution 8, 614-620.
18. Lamelas A, Prez-Brocal V, Gmez-Valero L, Gosalbes MJ, Moya A & Latorre A.
(2008). Evolution of the secondary symbiont Candidatus Serratia symbiotica in
aphid species of the subfamily Lachninae. Appl. Environ. Microbiol. 74, 4236-4240.
19. Tamames J & Moya A (2008). Estimating the extent of horizontal gene transfer in
metagenomic sequences. BMC Genomics 9, 136.
 8

20. Tagu D, Klingler JP, Moya A & Simon JC. (2008). Early progress in aphid genomics
and consequences for plant-aphid interactions studies. Molecular Plant-Microbe
Interactions 21, 701-708.
21. Gil R, Belda E, Gosalbes MJ, Delaye L, Vallier A, Vincent-Mongat C, Heddi A, Silva
FJ, Moya A & Latorre A (2008). Massive presence of insertion sequences in the
genome of SOPE, the primary endosymbiont of the rice weevil Sitophilus oryzae.
International Microbiology 11, 41-48.
22. Novais A, Cantn R, Coque TM, Moya A, Baquero F & Galn JC. (2008). Mutational
events in cefotaximase extended-spectrum beta-lactamases of teh CTX-M-1 cluster
involved in ceftazidime resistance. Antimicrob Agents Chemother 52, 2377-2382.
23. Llorns C, Futami R, Bezemer D & Moya A. (2008). The Gypsy database (GyDB) of
mobile genetic elements. Nucleic Acids Research 36(Database Issue), D38-D46.
24. Torres-Puente M, Cuevas JM, Jimnez-Hernndez N, Bracho MA, Garca-Robles I,
Wrobel B, Carnicer F, del Olmo J, Ortega E, Moya A & Gonzlez-Candelas F. (2008).
Genetic variability in hepatitis C virus and its role in antiviral treatment response.
Journal of Viral Hepatitis 15, 188-199.
25. Jimnez-Hernndez H, Sentandreu V, Castro JA, Torres-Puente M, Bracho A, Garca-
Robles I, Ortega E, Del Olmo J, Carnicer F, Gonzlez-Candelas F & Moya A. (2008).
Effect of antiviral treatment and host susceptibility on positive selection in hepatitic C
virus (HCV). Virus Research 131, 224-232.
26. DAuria G, Jimnez N, Peris-Bondia F, Pelaz C, Latorre A & Moya A. (2008) Virulence
factor rtx in Legionella pnemophila, evidence suggesting it is a modular
multifunctional protein. BMC Genomics 9, 14.
27. Corts T, Tagu D, Simon JC, Moya A & Martnez-Torres D. (2008). Sex versus
parthenogenesis: a transcriptomic approach of photoperiod response in the mode
aphid Acyrtosyphon pisum (Hemiptera: Aphididae). Gene 408, 146-156.
28. Torres-Puente M, Cuevas JM, Jimnez-Hernndez N, Bracho MA, Garca-Robles I,
Carnicer F, del Olmo J, Ortega E, Moya A, & Gonzlez-Candelas F. (2008). Hepatitis
C virus nd the controversial role of the interferon sensitivity determining region in the
response to interferon treatment. The Journal of Medical Virology 80, 247-253.
29. Torres-Puente M, Cuevas JM, Jimnez-Hernndez N, Bracho MA, Garca-Robles I,
Wrobel B, Carnicer F, del Olmo J, Ortega E, Moya A, & Gonzlez-Candelas F. (2008).
Using evolutionary tools to refine the new hypervariable region 3 within the envelope
2 of hepatitis C virus. Infection, Genetics and Evolution 8, 74-82.
30. Tamames J, Gil R, Latorre A, Peret J, Silva FJ & Moya A. (2007). The frontier
between cell and organelle: genome analysis of Candidatus Carsonella ruddii. BMC
Evolutionary Biology 7,181.
31. Gabaldn T, Peret J, Montero F, Gil R, Latorre A & Moya A. (2007). Structural
analyses of a hypothetical minimal metabolism. Philos. Trans. R. Soc. Lond. B. Biol.
Sci. 362, 1751-1762.
32. Sanjun R, Cuevas JM, Furi V, Holmes EC & Moya A. (2007). Selection for
robustness in mutagenized RNA viruses. PloS Genetics 3, e93.
33. Tamames J, Moya A & Valencia A. (2007). Modular organization in the reductive
evolution of protein-protein interaction networks. Genome Biology 8, R94.
34. Torres-Puente M, Cuevas JM, Jimnez-Hernndez N, Bracho MA, Garca-Robles I,
Carnicer J, del Olmo E, Ortega E, Moya A & Gonzlez-Candelas F. (2007).
Contribution of insertions and deletions to the variability of hepatitis C virus
populations. Journal of General Virology 88, 2198-2203.
35. Comas I, Moya A & Gonzlez-Candelas F. (2007). Phylogenetic signal and functional
categories in Proteobacteria genomes. BMC Evolutionary Biology 7, Suppl1:S7.
 9

36. Comas I, Moya A & Gonzlez-Candelas F. (2007). From phylogenetics to

phylogenomics: the evolutionary relationships of insect endosymbiotic -
proteobacteria as a test case. Systematic Biology 56, 1-16.
37. Furi V, Moya A & Sanjun R. (2007). The cost of replication fidelity in human
immunodeficiency virus type 1. Proc. Biol. Sci. 274, 225-230.
38. Jimnez-Hernndez N, Torres-Puente M, Bracho MA, Garca-Robles I, Ortega E, Del
Olmo J, Carnicer F, Gonzlez-Candelas F & Moya A. (2007). Epidemic dynamics of
two coexisting hepatitis C virus subtypes. J. Gen. Virol. 88, 123-133.
39. Carrillo FY, Sanjun R, Moya A, Cuevas JM. (2007). The effect of co- and
superinfection on the adaptive dynamics of vesicular stomatitis virus. Infect. Genet.
Evol. 7, 69-73.
40. Prez-Brocal V, Gil S, Ramos S, Lamelas A, Postigo M, Michelena JM, Silva FJ, Moya A
& Latorre A. (2006). A small microbial genome. The end of a long intimate
relationship? Science 314, 312-313.
41. Delmotte F, Rispe C, Schaber J, Silva FJ & Moya A. (2006). Tempo and mode of early
gene loss in endosymbiotic bacteria from insects. BMC Evolutionary Biology 6, 56.
42. Comas I, Moya A, Azad RK, Lawrence JG & Gonzlez-Candelas F. (2006). The
evolutionary origin of Xanthomonadales and the nature of the horizontal gene
transfer process. Molecular Biology and Evolution 23, 2049-2057.
43. Bracho A, Carrillo-Cruz FY, Ortega E, Moya A & Gonzlez-Candelas F. (2006). A new
subtype of hepatitis C virus genotype 1: complete genome sequencing and
phylogenetic relationship of and Equatorial Guinea isolate. Journal of General
Virology 87, 1697-1702.
44. Wrbel B, Torres-Puente M, Jimnez N, Bracho MA, Garca-Robles I, Moya A &
Gonzlez-Candelas F. (2006). Analysis of the overdispersed clock in the short term
evolution of hepatitis C virus: using the E1/E2 gene sequences to infer infection
dates in a single source outbreak. Molecular Biology and Evolution 23, 1242-1253.
45. Sentandreu V, Castro JA, Aylln MA, Rubio L, Guerra J, Gonzlez-Candelas G & Moya
A. (2006). Evolutionary anlisis of genetic variation observed in citrus tristeza virus
(CTV) after host pasaje. Archives of Virology 151, 875-894.
46. Bracho MA, Gosalbes MJ, Gonzlez F, Moya A & Gonzlez-Candelas F. (2006).
Molecular epidemiology and evolution in an outbreak of fulminant hepatitis B virus.
Journal of Clinical Microbiology 44, 1288-1294.
47. Aylln MA, Rubio L, Sentandreu V, Moya A, Guerri J & Moreno P. (2006). Variations
in two gene sequences of citrus tristeza virus after host passage. Virus Genes 32,
119-128.
48. Gaudermann P, Vogl I, Zientz E, Silva FJ, Moya A, Gross R & Dandekar T. (2006).
Analysis of and function predictions for previously conserved hypothetical or putative
proteins in Blochmannia floridanus. BMC Microbiology 6, 1.
49. Sabater-Muoz B, Legeai F, Rispe C, Bonhomme J, Dearden P, Dossat C, Duclert A,
Gauthier JP, Giblot Ducray D, Hunter W, Dang P, Kambhampati S, Martnez-Torres D,
Corts T, Moya A, Nakabachi A, Philippe C, Prunier-Leterme N, Rahb Y, Simon JC,
Stern DL, Wincker P & Tagu D. (2006). Large-scale gene discovery in the pea aphid
Acyrthosiphon pisum (Hemiptera). Genome Biology 7, R21.
50. Lpez-Labrador FX, Bracho MA, Berenguer M, Coscoll M, Rayn JM, Prieto M,
Carrasco D, Gmez MD, Moya A & Gonzlez-Candelas F. (2006). Genetic similarity of
hepatitis C virus and fibrosis progession in chronic and recurrent infection after liver
transplantation. Journal of Viral Hepatitis 13, 104-115.
51. Schaber J, Rispe C, Wernegreen J, Buness A, Delmotte F, Silva FJ & Moya A. (2005).
Gene expression levels influence amino acid usage and evolutionary rates in
endosymbiotic bacteria. Gene 352, 109-117.
 10

52. Sanjun R, Cuevas JM, Moya A & Elena SF. Epistasis and the adaptability of an RNA
virus. Genetics 170, 1001-1008.
53. Prez-Brocal V, Latorre A, Gil R & Moya A. (2005). Comparative analisis of two
genomic regions among four strains of Buchnera aphidicola, primary endosymbiont
of aphids. Gene 345, 73-80.
54. Oliver P, Balany J, Ramn MM, Picornell A, Serra L, Moya A & Castro JA. (2005).
Population dynamics of the two majority mitochondrial DNA haplotypes in
experimental. populations of Drosophila subobscura. Genome 48, 1010-1018.
55. Furi V, Moya A & Sanjun R. (2005). The cost of replication fidelity in an RNA virus.
Proceedings of the National Academy of Sciences USA 102, 10233-10237.
56. Fares MA, Moya A & Barrio E. (2005). Adaptive evolution in GroEL from distantly
related endosymbiotic bacteria of insects. Journal of Evolutionary Biology 18, 651-
660.
57. Cuevas JM, Sanjun R, Moya A & Elena SF. (2005). Mode of selection and
experimental evolution of antiviral drugs resistance in vesicular stomatitis virus.
Infection, Genetics and Evolution 5, 55-65.
58. Cuevas JM, Moya A & Sanjun R. (2005). Following the very initial growth of
biological RNA viral clones. Journal of General Virology 86, 435-443.
59. Comas I, Moya A & Gonzlez-Candelas F. (2005). Validating viral quasispecies with
digital organisms: a re-examination of the critical mutation rate. BMC Evolutionary
Biology 5, 5.
60. Bracho MA, Gosalbes MJ, Blasco D, Moya A & Gonzlez-Candelas F. (2005).
Molecular epidemiology of a hepatitis C virus outbreak in a hemodialysis unit. Journal
of Clinical Microbiology 43, 2750-2755.
61. Belda E, Moya A & Silva FJ. (2005). Genome rearrangement distances and gene
order phylogeny in -proteobacteria. Molecular Biology and Evolution 22, 1456-
1467.
62. Zientz E, Gil R, van Ham R, Delmotte F, Gonzlez-Candelas F, Kamerbeek J, Latorre
A, Rausell C, Silva FJ, Gadau J, Hlldobler B, Moya A & Gross R. (2004).
Blochmannia spp.: Intracellular endosymbiotic bacteria of carpenter ants. Nova Acta
Leopoldina 88, 113-118.
63. Rispe C, Delmotte F, van Ham R.C.H.J. & Moya A. (2004). Mutational and selective
pressures on codon and aminoacid usage in Buchnera, endosymbiotic bacteria of
aphids. Genome Research 14, 44-53.
64. Sanjun R, Moya A & Elena SF. (2004). The contribution of epistasis to the
architecture of fitness in an RNA virus. Proceedings of the National Academy of
Sciences USA 101, 15376-15379.
65. Sanjun R, Moya A & Elena SF. (2004). The distribution of fitness effects caused by
single-nucleotide substitutions in a RNA virus. Proceedings of the National Academy
of Sciences USA 101, 8396-8401.
66. Sanjun R, Codoer FM, Moya A & Elena SF. (2004). Natural selection and the
organ-specific differentiation of HIV-1 V3 hypervariable region. Evolution 58, 1185-
1194.
67. Sabater-Muoz B, van Ham RCHJ, Moya A, Silva FJ & Latorre A. (2004). Evolution of
the leucine gene cluster in Buchnera aphidicola. Insights from chromosomal versions
of the cluster. Journal of Bacteriology 186, 2646-2654.
68. Ortz-Rivas B, Moya A & Martnez-Torres D. (2004). Molecular systematics of aphids
(Homoptera: Aphididae): New insights from the long-wavelength opsin gene.
Molecular Phylogenetics and Evolution 30, 24-37.
69. Moya A, Latorre A, Gil R & Silva FJ. (2004). Genome reduction in endosymbiotic
bacteria of insects: some evolutionary considerations. Nova Acta Leopoldina 88, 41-
47.
 11

70. Moya A & Latorre A. (2004). Las concepciones internalista y externalista de la

evolucin biolgica. Ludus Vitalis 12, 179-196.
71. Gmez-Valero L, Soriano-Navarro M, Prez-Brocal V, Heddi A, Moya A, Garca-
Verdugo JM & Latorre A. (2004). Coexistence of Wolbachia with Buchnera aphidicola
and a secondary symbiont in the aphid Cinara cedri. Journal of Bacteriology 186,
6626-6633.
72. Christie JS, Castro JA, Oliver P, Picornell A, Ramn MM & Moya A. (2004). Fitness
and life-history traits of the two major mitochondrial DNA haplotypes of Drosophila
subobscura. Heredity 93, 371-378.
73. Bastolla U, Moya A, Viguera E, E. & van Ham RCHJ. (2004). Genomic determinants
of protein folding thermodynamics in prokaryotic organisms. Journal of Molecular
Biology 343, 1451-1466.
74. Bracho MA, Garca-Robles I, Jimnez N, Torres-Puente M, Moya A & Gonzlez-
Candelas F. (2004). Effect of oligonucleotide primers in determining viral variability
within hosts. BMC Virology Journal 1, 13.
75. van Ham RCHJ, Kamerbeek J, Palacios C, Rausell C, Abascal F, Bastolla U, Fernndez
JM, Jimnez L, Postigo M, Silva FJ, Tamames J, Viguera E, Latorre A, Valencia A,
Morn F & Moya A. (2003). Reductive genome evolution in Buchnera aphidicola.
Proceedings of the National Academy Sciences USA 100, 581-586.
76. Torres M, Bracho MA, Jimnez N, Garcia-Robles I, Moya A & Gonzlez-Candelas F.
(2003). Sampling and repeatibility effects in the evaluation of HCV genetic variability.
Journal of General Virology 84, 2343-2350.
77. Russell JA, Latorre A, Sabater-Muoz B, Moya A & Moran NA. (2003). Side-stepping
secondary symbionts: widespread horizontal transfer across and beyond the
Aphidoidea. Molecular Ecology 12, 1061-1075.
78. Ramos S, Moya A & Martnez-Torres D. (2003). Identification of a gene that is
overexpressed in aphids reared under short photoperiod. Insect Biochemistry and
Molecular Biology 33, 289-298.
79. Gonzlez-Candelas F, Bracho MA & Moya A. (2003). Molecular epidemiology and
forensic genetics: application to a hepatitis C virus transmission event at an
haemodialysis unit. Journal of Infectious Diseases 187, 352-358.
80. Gil R, Silva FJ, Zientz E, Delmotte F, Gonzlez-Candelas F, Latorre A, Rausell C,
Kamerbeek J, Gadau J, Hlldobler B, van Ham RCHJ, Gross R & Moya A. (2003). The
genome sequence of Blochmannia floridanus: comparative analysis of reduced
genomes. Proceedings National Academy Sciences USA 100, 9388-9393.
81. Fares MA, Bezemer D, Moya A & Marn I. (2003). Selection on coding regions
determined Hox7 genes evolution. Molecular Biology and Evolution 20, 2104-2112.
82. DUrso F, Sambade A, Moya A, Guerri J & Moreno P. (2003). Diversity of haplotype
distribution of two genomic regions of citrus tristeza virus in populations from
Eastern Spain. Molecular Ecology 12, 517-526.
83. Cuevas JM, Moya A & Elena SF. (2003). Evolution of RNA virus in spatially-
structured heterogeneous environments. Journal of Evolutionary Biology 16, 456-
466.
84. Castro JA, Oliver P, Christie JS, Picornell A, Ramn MM & Moya A. (2003).
Assortative mating and fertility in two Drosophila subobscura strains with different
mitochondrial haplotypes. Genetica 119, 295-301.
85. Yuste E, Moya A & Lpez-Galndez C. (2002). Frequency-dependent selection in
human immunodeficiency virus. Journal of General Virology 83, 103-106.
86. Oliver P, Castro JA, Picornell A, Ramn MM, Sol E, Balany J, Latorre A & Moya A.
(2002). Linkage disequilibrium between mtDNA haplotypes and chromosomal
arrangements in a natural population of Drosophila subobscura. Heredity 89, 133-
138.
 12

87. Moya A, Latorre A, Sabater B & Silva F. (2002). Comparative molecular evolution of
primary (Buchnera) and secondary symbionts of aphids based on two protein-coding
genes. Journal of Molecular Evolution 55, 127-137.
88. Gil R, Sabater-Muoz B, Latorre A, Silva FJ & Moya A. (2002). Extreme genome
reduction in Buchnera spp.: towards the minimal genome needed for symbiotic life.
Proceedings of the National Academy Sciences USA 99, 4454-4458.
89. Fares MA, Ruiz-Gonzlez MX, Moya A, Elena SF & Barrio E. (2002). GroEL as an
enabler for bacterial endosymbiotic lifestyle. Nature 417, 398.
90. Fares MA, Elena SF, Ortiz J, Moya A & Barrio E. (2002). A sliding window-based
method to detect selective contrainsts in protein-coding genes and its application to
RNA viruses. Journal of Molecular Evolution 55, 509-521.
91. Fares MA, Barrio E, Sabater-Muoz B & Moya A. (2002). The evolution of the heat-
shock protein GroEL from Buchnera, the primary endosymbiont of aphids, is
governed by positive selection. Molecular Biology and Evolution 19, 1162-1170.
92. Cuevas JM, Elena SF & Moya A. (2002). Molecular basis of adaptive convergence in
experimental populations of RNA viruses. Genetics 162, 533-542.
93. Silva FJ, Latorre A & Moya A. (2001). Genome size reduction through multiple
events of gene disintegration in Buchnera APS. Trends in Genetics 17, 615-618.
94. Moya A, Guirao P, Cifuentes D, Beitia F & Cenis JL. (2001). Genetic diversity of
Iberian populations of Bemisia tabaci (Hemiptera: Aleyrodidae) based on RAPDs.
Molecular Ecology 10, 891-897.
95. Miralles R, Ferrer R, Sol RV, Moya A & Elena SF. (2001). Multiple infection
dynamics has pronounced effects on the fitness of RNA viruses. Journal of
Evolutionary Biology 14, 654-662.
96. Martnez-Torres D, Buades C, Latorre A & Moya A. (2001). Molecular systematics of
aphids and their primary endosymbionts. Molecular Phylognetics and Evolution 20,
437-449.
97. Marn I, Fars MA, Gonzlez-Candelas F, Barrio E & Moya A. (2001). Detecting
changes in the functional constraints of paralogous genes. Journal of Molecular
Evolution 52, 17-28.
98. Fares MA, Moya A, Escarms C, Domingo E & Barrio E. (2001). Evidence for positive
selection in the capsid protein-coding region of the foot-and-mouth disease virus
(FMDV) genome. Molecular Biology and Evolution 18, 10-21.
99. Jimnez N, Torres M, Bracho MA, Garca Robles I, Gonzlez Candelas F & Moya A.
(2001). Epidemiologa molecular del virus de la hepatitis C: estudio a gran escala.
Publicacin Oficial de la Sociedad Espaola Interdisciplinaria del SIDA 12, 303-304.
100. Elena SF, Dopazo J, De la Pea M, Flores R, Diener TO & Moya A. (2001).
Phylogenetic analysis of viroid and viroid-like satellite RNAs from plants: a
reassessment. Journal of Molecular Evolution 53, 155-159.
101. van Ham RCHJ, Gonzlez-Candelas F, Silva F, Sabater B, Moya A & Latorre A.
(2000). Post-symbiotic plasmid acquisition and evolution of the repA1-replicon in
Buchnera aphidicola. Proceedings of the National Academy Sciences USA 97, 10855-
10860.
102. Miralles R, Moya A & Elena SF. (2000). Diminishing returns of population size in the
rate of RNA virus adaptation. Journal of Virology 74, 3566-3571.
103. De la Pea M, Elena SF & Moya A. (2000). Effect of deleterious mutation-
accumulation on the fitness of RNA bacteriphage MS2. Evolution, 54, 686-691.
104. Miralles R, Moya A & Elena SF. (1999). Effect of population patchiness and migration
rates on the adaptation and divergence of vesicular stomatitis virus quasispecies
populations. Journal of General Virology 80, 2051-2059.
105. Miralles R, Gerrish PJ, Moya A & Elena SF. (1999). Clonal interference and the
evolution of RNA viruses. Science 285, 1745-1747.
 13

106. Medrano L, Menndez-Arias L, De Jorge R, Villahermosa ML, Contreras G, Prez-

Alvarez L, Moya A & Njera R. (1999). Sequence analysis of the polymerase domain
of HIV-1 reverse transcriptase in Nave and zidovudine-treated individuals reveals a
higher polymorphism in -helices as compared with -strands. Virus Genes 18, 203-
210.
107. van Ham RCHJ, Martnez-Torres D, Moya A & Latorre A. (1999). Plasmid-encoded
anthranilate synthase (TrpEG) in Buchnera aphidicola from aphids of the family
Pemphigidae. Applied and Environmental Microbiology 65, 117-125.
108. Garca-Martnez J, Moya A, Raga JA & Latorre A. (1999). Genetic differentiation in
the striped dolphin Stenella coeruleoalba from European waters according to mtDNA
restriction analysis. Molecular Ecology 8, 1069-1073.
109. De Renzi M, Moya A & Peret J. (1999). Evolution, development and complexity in
Pere Alberch (1954-1998). Journal of Evolutionary Biology 12, 624-626.
110. Elena SF & Moya A. (1999). Rate of deleterious mutation and the distribution of its
effects on fitness in vesicular stomatitis virus. Journal of Evolutionary Biology 12,
1078-1088.
111. Castro JA, Ramn M, Picornell A & Moya A. (1999). The genetic structure of
Drosophila subobscura populations from the islands of Majorca and Minorca (Balearic
Islands, Spain) based on allozymes and mitochondrial DNA. Heredity 83, 271-279.
112. Aylln MA, Rubio L, Moya A, Guerri J & Moreno P. (1999). The haplotype distribution
of two genes of citrus tristeza virus is altered after host change or aphid
transmission. Virology 255, 32-39.
113. Moya A. (1998). La medida y la escala de la evolucin. Educacin Abierta 133, 11-
34.
114. Garca-Martnez J, Castro JA, Ramn M, Latorre A & Moya A. (1998). Mitochondrial
DNA haplotype frequencies in natural ans experimental populations of Drosophila
subobscura. Genetics 149, 1377-1382.
115. Elena SF, Dvila M, Novella IS, Holland JJ, Domingo E & Moya A. (1998).
Evolutionary dynamics of fitness recovery from the debilitating effects of Mllers
ratchet. Evolution 52, 309-314.
116. Castilla AM, Fernndez-Pedrosa V, Harris JD, Gonzlez A, Latorre A & Moya A.
(1998). Mitochondrial DNA divergence suggests that Podarcis hispanica atrata
(Squamata: Lacertidae) from the Columbretes islands merits specific distinction.
Copeia 4, 1037-1040.
117. Castilla AM, Fernndez-Pedrosa V, Backeljau T, Gonzlez A, Latorre A & Moya A.
(1998). Conservation genetics of insular Podarcis lizards using partial cytochrome b
sequences. Molecular Ecology 7, 1407-1411.
118. Bracho A, Moya A & Barrio E. (1998). Contribution of Taq induced errors to the
estimation of the diversity of RNA viruses. Journal of General Virology 79, 2921-
2928.
119. van Ham RCHJ, Moya A & Latorre A. (1997). Putative evolutionary origin of plasmids
carrying the genes involved in leucine biosynthesis in Buchnera aphidicola
(endosymbiont of aphids). Journal of Bacteriology 179, 4768-4777.
120. Miralles R, Moya A & Elena SF. (1997). Is group selection a factor modulating the
virulence of RNA viruses? Genetical Research 69, 165-172.
121. Martnez-Torres D, Moya A, Hebert PDN & Simon JC. (1997). Geographic distribution
and seasonal variation of mitochondrial DNA haplotypes in the aphid Rhopalosiphum
padi. Bulletin of Entomological Research 87, 161-167.
122. Martnez Torres D, Carri R, Latorre A, Simon JC, Hermoso A & Moya A. (1997).
Assessing the nucleotide diversity of three aphid species by RAPD. Journal of
Evolutionary Biology 10, 459-477.
 14

123. Elena SF, Miralles R & Moya A. (1997). Frequency-dependent selection in a

mammalian RNA virus. Evolution 51, 984-987.
124. Simon JC, Martnez-Torres D, Latorre A, Moya A & Hebert PDN. (1996). Molecular
characterization of cyclic and obligate parthenogens in the aphid Rhopalosiphum padi
(L.). Proceedings of the Royal Society B 263, 481-486.
125. Rossi MS, Barrio E, Latorre A, Quezada-Daz J, Hasson E, Moya A & Fontdevila A.
(1996). The evolutionary history of Drosophila buzzatii. XXX. Mitochondrial DNA
polymorphism in original and colonizing populations. Molecular Biology and Evolution
13, 314-323.
126. Novella IS, Elena SF, Moya A, Domingo E & Holland J. (1996). Repeated transfer of
small RNA virus populations leading to balanced fitness with infrequent stochastic
drift. Molecular and General Genetics 252, 733-738.
127. Novella IS, Cilnis M, Elena SF, Kohn J, Moya A, Domingo E & Holland JJ. (1996).
Large population passages of vesicular stomatitis virus in interferon-treated cells
select variants of only limited resistence. Journal of Virology 70, 6414-6417.
128. Martnez-Torres D, Simon JC, Fereres A & Moya A. (1996). Genetic variation in
natural populations of the aphid Rhopalosiphum padi as revealed by maternally
inherited markers. Molecular Ecology 5, 659-670.
129. Galiana A, Gonzlez-Candelas F & Moya A. (1996). Postmating isolation analysis in
founder-flush experimental populations of Drosophila pseudoobscura. Evolution 50,
941-944.
130. Esteban JI, Gmez J, Martell M, Cabot T, Quer J, Camps J, Gonzlez A, Otero T,
Moya A, Esteban R & Guardia J. (1996). Transmission of hepatitis C virus by a
cardiac surgeon. New England Journal of Medicine 334, 555-560.
131. Elena SF, Gonzlez-Candelas F, Novella IS, Duarte EA, Clarke DK, Domingo E,
Holland JJ & Moya A. (1996). Evolution of fitness in experimental populations of
vesicular stomatitis virus. Genetics 142, 673-679.
132. Escarms C, Dvila M, Charpentier N, Bracho A, Moya A & Domingo E. (1996).
Genetic lesions associated to Mullers ratchet in an RNA virus. Journal of Molecular
Biology 264, 255-267.
133. Elena SF, Moya A & Gonzlez Candelas F. (1996). Sobre la simulacin de procesos
de evolucin molecular: consideraciones sobre la derivacin y contrastacin del
estimador de la varianza de la divergencia nucleotdica a partir de fragmentos de
restriccin. Qestii 20, 327-346.
134. Buades C & Moya A. (1996). Phylogenetic analysis of the isopenicillin-N-synthetase
horizontal gene transfer. Journal of Molecular Evolution 42, 537-542.
135. Novella IS, Elena SF, Moya A, Domingo E & Holland JJ. (1995). Size of genetic
bottlenecks leading to virus fitness loss is determined by mean initial population
fitness. Journal of Virology 69, 2869-2872.
136. Novella IS, Duarte EA, Elena SF, Moya A, Domingo E & Holland JJ. (1995).
Exponential increases of RNA virus fitness during large population transmissions.
Proceedings of the National Academy of Sciences USA 92, 5841-5844.
137. Novella IS, Clarke DK, Quer J, Duarte EA, Lee CH, Weaver SC, Elena SF, Moya A,
Domingo E & Holland JJ. (1995). Extreme fitness differences in mammalian and
insect hosts after continuous replication of vesicular stomatitis virus in sandfly cells.
Journal of Virology 69, 6805-6809.
138. Moya A, Galiana A & Ayala FJ. (1995). Founder-effect speciation theory: failure of
experimental corroboration. Proceedings of the National Academy of Sciences USA
92, 3983-3986.
139. Guirao P, Moya A & Cenis JL. (1995). Optimal use of random amplified polymorphic
DNA in estimating the genetic relationship of four major Meloidogyne spp.
Phytopathology 85, 547-551.
 15

140. Gonzlez-Candelas F, Elena SF & Moya A. (1995). Approximate variance of

nucleotide divergence between two sequences estimated from restriction fragment
data. Genetics 140, 1443-1446.
141. Fernndez-Pedrosa V, Gonzlez A, Planelles M, Moya A & Latorre A. (1995).
Mitochondrial DNA variability in three natural mediterranean populations of Aphanius
iberus. Biology of Conservation 72, 251-256.
142. Bracho A, Martnez-Torres D, Moya A & Latorre A. (1995). Discovery and molecular
characterization of a plasmid localized in Buchnera sp. bacterial endosymbiont of the
aphid Rhopalosiphum padi. Journal of Molecular Evolution 41, 67-73.
143. Gonzlez A, Carri R, Fernndez-Pedrosa V & Moya A. (1994). Lack of seasonal
changes in mitochondrial DNA of a Drosophila subobscura population. Journal of
Evolutionary Biology 7, 29-38.
144. Duarte EA, Novella IS, Ledesma S, Clarke DK, Moya A, Elena SF, Domingo E &
Holland JJ. (1994). Subclonal components of consensus fitness in an RNA virus clone.
Journal of Virology 68, 4295-4301.
145. Clarke DK, Duarte EA, Elena SF, Moya A, Domingo E & Holland J. (1994). The red
queen reigns in the kingdom of RNA viruses. Proceedings of the National Academy of
Sciences USA 91, 4821-4824.
146. Barrio E, Latorre A & Moya A. (1994). Phylogeny of the Drosophila obscura species
group deduced from mitochondrial DNA sequences. Journal of Molecular Evolution
39, 478-488.
147. Moya A, Rodriguez-Cerezo E & Garca-Arenal F. (1993). Genetic structure of natural
populations of the plant RNA virus tobacco mild green mosaic virus. Molecular
Biology and Evolution 10, 449-456.
148. Moya A, Barrio E, Martnez D, Latorre A, Gonzlez-Candelas F, Ramn M & Castro
JA. (1993). Molecular characterization and cytonuclear disequilibria of two Drosophila
subobscura mitochondrial haplotypes. Genome 36, 890-898.
149. Lpez-Bueno JA, Moya A & Gonzlez-Candelas F. (1993). The effect of periodic
bottlenecks on the competitive ability of Drosophila pseudoobscura lines. Heredity
70, 60-66.
150. Galiana A, Moya A & Ayala FJ. (1993). Founder-flush speciation theory in Drosophila
pseudoobscura: a large-scale experiment. Evolution 47, 432-444.
151. Duarte EA, Clarke DK, Moya A, Elena SF, Domingo E & Holland J. (1993). Many
trillionfold amplification of single RNA virus particles fails to overcome the Muller's
ratchet effect. Journal of Virology 67, 3620-3623.
152. Dopazo J, Taberner A & Moya A. (1993). Quantitative characterization of antigens
using monoclonal antibody reactivities. Computer Applications in Biological Sciences
9, 101-107.
153. Clarke DK, Duarte EA, Moya A, Elena SF, Domingo E & Holland. (1993). Genetic
bottlenecks and population passages cause profound fitness differences in RNA
viruses. Journal of Virology 67, 222-228.
154. Raz R, Jos M, Moya A, Martnez-Izquierdo JA & Puigdomenech P. (1992). Different
mechanisms generating sequence variability are revealed in distinct regions of the
hydroxyproline-rich glycoprotein gene from maize and related species. Molecular and
General Genetics 233, 252-259.
155. Martnez D, Moya A, Latorre A & Fereres A. (1992). Mitochondrial DNA variation in
Rhopalosiphum padi (Homoptera: Aphididae) populations from four distant Spanish
localities. Annals of Entomological Society of America 85, 241-246.
156. Lpez-Bueno JA & Moya A. (1992). GEOSEQ: A Pascal program to calculate
statistical geometry parameters of aligned nucleic acid sequences. Computer
Applications in Biological Sciences 8, 385-388.
 16

157. Latorre A, Hernndez C, Martnez D, Castro JA, Ramn M & Moya A. (1992).
Population structrure and mitochondrial DNA gene flow in Old World populations of
Drosophila subobscura. Heredity 68, 15-24.
158. Gonzlez-Candelas F, Crnobrnja J, Kalezic ML & Moya A. (1992). Gene flow rates in
yugoslavian populations of the smooth newt Triturus vulgaris. Journal of Evolutionary
Biology 5, 481-490.
159. Hernndez C, Elena SF, Moya A & Flores R. (1992). Pear blister canker viroid is a
member of the apple scar skin subgroup (apscaviroids) and has also sequence
homologies with viroids from other subgroups. Journal of General Virology 73,
2503-2507.
160. Hernndez C, Dars JA, Elena SF, Moya A & Flores R. (1992). The strands of both
polarities of a small circular RNA from carnation self-cleave in vitro through
alternative double- and single-hammerhead structures. Nucleic Acids Research 20,
6323-6329.
161. Elena SF, Gonzlez-Candelas F & Moya A. (1991). Does the VP1 gene of foot-and-
mouth disease virus behave as a molecular clock? Journal of Molecular Evolution 35,
223-229.
162. Duarte E, Clarke D, Moya A, Domingo E & Holland J. (1992). Rapid fitness losses in
mammmalian RNA virus clones due to Muller's ratchet. Proceedings of the National
Academy of Sciences USA 89, 6015-6019.
163. Barrio E, Latorre A, Moya A & Ayala FJ. (1992). Phylogenetic reconstruction of the
Drosophila obscura group based on mitochondrial DNA. Molecular Biology and
Evolution 9, 621-635.
164. Barrio E, Buades C & Moya A. (1992). Geometra estadstica en los espacios de
distancia y secuencia: dos aplicaciones. Questiio 16, 27-42.
165. Yez RJ, Moya A, Domingo E & Viuela E. (1991). Repetitive nucleotide sequencing
of a dispensable DNA segment in a clonal population of african swine fever virus.
Virus Research 20, 265-272.
166. Peng TX, Moya A & Ayala FJ. (1991). Two modes of balancing selection in
Drosophila melanogaster: overcompensation and overdominance. Genetics 128,
381-391.
167. Villaverde A, Martnez MA, Sobrino F, Dopazo J, Moya A & Domingo E. (1991).
Fixation of mutations at the VP1 gene of foot-and-mouth disease virus. Can
quasispecies define a transient molecular clock? Gene 103, 147-153.
168. Rodriguez-Cerezo E, Elena SE, Moya A & Garca-Arenal F. (1991). High genetic
stability in natural populations of the plant RNA virus tobacco mild green mosaic
virus. Journal of Molecular Evolution 32, 328-332.
169. Moya A & Marqus S. (1991). Seleccin natural: presencia y contrastabilidad en la
teora de la evolucin. Revista Espaola de Paleontologa Nmero Extraordinario,
61-65.
170. Martnez MA, Carrillo C, Gonzlez-Candelas F, Moya A, Domingo E & Sobrino F.
(1991). Fitness alteration of foot-and-mouth disease virus mutants: measurement of
the adaptability of viral quasispecies. Journal of Virology 65, 3954-3957.
171. Milosevic M, Moya A & Ayala FJ. (1991). Overcompensation as a mechanism for
maintaining polymorphism: egg-to-adult viability in Drosophila. Genetical Research
57, 267-272.
172. Cristina J, Moya A, Arbiza J, Russi J, Hortal M, Albo C, Garca-Barreno B, Garca O,
Melero J & Portela A. (1991). Evolution of the G and P genes of human respiratory
syncytial virus (subgroup A) studied by the RNase A mismatch cleavage method.
Virology 184, 210-218.
173. Elena S & Moya A. (1991). Algunos parmetros evolutivos de los RNAs de viroides y
de tipo viroidal. Revista de Ciencia 8, 9-15.
 17

174. Elena S, Dopazo J, Flores R, Diener TO & Moya A. (1991). Phylogeny of viroids,
viroidlike satellite RNAs, and the viroidlike domain of hepatitis delta virus.
Proceedings of the National Academy of Sciences USA 88, 5631-5634.
175. Pealva MA, Moya A, Dopazo J & Ramn D. (1990). Sequences of isopenicillin N
synthetase genes suggest horizontal gene transfer from prokaryotes to eukaryotes.
Proceedings of the Royal Society B241, 164-169.
176. Milosevic M, Moya A & Ayala FJ. (1990). Fertility and viability at the Sod locus in
Drosophila melanogaster: overdominance and alloprocoptic selection. Genetica 82,
183-187.
177. Gonzlez-Candelas F, Mnsua JL & Moya A. (1990). Larval competition in Drosophila
melanogaster: effects on development time. Genetica 82, 33-44.
178. Fos M, Domnguez MA, Latorre A & Moya A. (1990). Mitochondrial DNA evolution in
experimental populations of Drosophila subobscura. Proceedings of the National
Academy of Sciences USA 87, 4198-4201.
179. Carrillo C, Dopazo J, Moya A, Gonzlez M, Martinez MA, Saiz JC & Sobrino F. (1990).
Comparison of vaccine strains and the virus causing the 1986 foot-and-mouth
disease outbreak in Spain: epizootiological analysis. Virus Research 15, 45-56.
180. Adell JC, Moya A, Molina V & Gonzlez-Candelas F. (1990). On the analysis of
viability data: an example with Drosophila. Heredity 65, 39-46.
181. Rodriguez-Cerezo E, Moya A & Garca-Arenal F. (1989). Variability and evolution of
the plant RNA virus pepper mild mottle virus. Journal of Virology 63, 2198-2203.
182. Moya A, Latorre A & Ayala FJ. (1989). Male-female interactions in Drosophila
melanogaster: a fertility model with one-locus and three alleles. Zeitschrift fr
Zoologische Systematik und Evolutionsforschung 27, 317-325.
183. Moya A & Ayala FJ. (1989). Fertility interactions in Drosophila: theoretical model and
experimental tests. Journal of Evolutionary Biology 2, 1-12.
184. Castro JA & Moya A. (1989). Un programa de ordenador para la deteccin de
seleccin a partir de estimas generacionales de frecuencias gnicas. Revista de
Ciencia 5, 51-60.
185. Smit-McBride Z, Moya A & Ayala FJ. (1988). Linkage disequilibrium in natural and
experimental populations of Drosophila melanogaster. Genetics 120, 1043-1051.
186. Moya A, Gonzlez-Candelas F & Mnsua JL. (1988). Larval competition in Drosophila
melanogaster: frequency dependence of viability. Theoretical and Applied Genetics
75, 366-377.
187. Mont S, Moya A & Marinkovic D. (1988). A test to detect association between
autosomal and sex-linked loci in random mating populations: an example with
Drosophila melanogaster.Gntique Selection et Evolution 20, 417-424.
188. Latorre A, Moya A & De Frutos R. (1988). Patterns of puffing activity and
chromosomal polymorphism in Drosophila subobscura. IV. Effect of inversions on
gene expression. Evolution 42, 1298-1308.
189. Latorre A, Barrio E, Moya A & Ayala FJ. (1988). Mitochondrial DNA evolution in the
Drosophila obscura group. Molecular Biology and Evolution 5, 717-728.
190. Hernndez A, Moya A, Sekulic M & Marinkovic D. (1988). ADH, GPDH and SOD
enzyme activities of second and third chromosomal genotypes from two
geographically different populations of Drosophila melanogaster. Zeitschrift fr
Zoologische Systematik und Evolutionsforschung 26, 250-260.
191. Galiana A & Moya A. (1988). Isolation among ancestral and derived strains of
Drosophila pseudoobscura. Drosophila Information Service 67, 39.
192. Dopazo J, Sobrino F, Palma EL, Domingo E & Moya A. (1988). VP1 protein gene of
foot-and-mouth disease virus: a quasispecies model of molecular evolution.
Proceedings of the National Academy of Sciences USA 85, 6811-6815.
 18

193. Botella LM, Moya A & Mnsua JL. (1988). The effects of competition for food on
pupal mortality in Drosophila. Evolucin Biolgica 2, 109-121.
194. Barrio E, Moya A, Prez-Alonso M & Latorre A. (1988). Functional role of the G-C
sequences in the Drosophila mitochondrial DNA. Life Science Advances (Genetics) 7,
149-153.
195. Adell JC, Moya A & Botella LM. (1988). Larval arrest in the development of the
lygaeid bug Spilostethus pandurus under competition for food and space. Evolucin
Biolgica 2, 251-260.
196. Marinkovic D, Tucic N, Moya A & Ayala FJ. (1987). Genetic diversity and linkage
disequilibrium in Drosophila melanogaster with different rates of development.
Genetics 117, 513-520.
197. Marinkovic D, Moya A & Andjelkovic M. (1987). Quantitative-genetic regulation of
ADH, GPD and SOD enzyme activity variation in Drosophila melanogaster. Gentica
Ibrica 39, 397-415.
198. Belo M, Moya A & Ayala FJ. (1987). Male-female interactions in two Drosophila
equinoxialis subspecies. Gentica Ibrica 39, 425-438.
199. Tibayrenc M, Ward P, Moya A & Ayala FJ. (1986). Natural populations of
Trypanosoma cruzi, the agent of Chagas disease, have a complex multiclonal
structure. Proceedings of the National Academy of Sciences USA 83, 115-119.
200. Peng T, Moya A & Ayala FJ. (1986). Resistance to irradiation by superoxide
dismutase: possible adaptive role of a natural polymorphism in Drosophila
melanogaster. Proceedings of the National Academy of Sciences USA 83, 684-687.
201. Moya A & Latorre A. (1986). Hyperbolic relationship between per-female
productivity and density in two strains of Drosophila pseudoobscura. Genetika 18,
221-226.
202. Moya A, Gonzlez-Candelas F, Botella LM & Ayala FJ. (1986). Density-dependent
pre-adult mortality in Drosophila: a theoretical model and experimental tests. Acta
Oecologica. Oecologia Generalis 7, 231-242.
203. Moya A, Gonzlez-Candelas F & Ayala FJ. (1986). Intra- and intergenotypic
competition in Drosophila melanogaster: effects of density on larva survival and rate
of development. Genetica 70, 59-67.
204. Moya A & Castro J. (1986). Larval competition in Drosophila melanogaster: the
model of the bands of density. Oikos 47, 280-286.
205. Moya A. (1986). Problemas de metrizacin y medicin en biologa de poblaciones.
Qestiio 10, 39-44.
206. Latorre A, Moya A & Ayala FJ. (1986). Evolution of mitochondrial DNA in Drosophila
subobscura. Proceedings of the National Academy of Sciences USA 83, 8649-8653.
207. Dopazo J, Barber A & Moya A. (1986). Generacin de seleccin dependiente de
frecuencia en sistemas de dos competidores. 1. Modelo del espacio biolgico unidad
aplicado a competidores mviles. Qestiio 10, 25-37.
208. Moya A, Mnsua JL & Gonzlez-Candelas F. (1985). Dinmica de mortalidad durante
la fase larva-adulto de Drosophila melanogaster. Gentica Ibrica 37, 141-154.
209. Moya A & Botella LM. (1985). Larva-to-adult and pupa-to-adult mortality dynamics
in crowded cultures of Drosophila melanogaster. Genetica 67, 201-207.
210. Castro J, Moya A & Mnsua JL. (1985). Competitive selection in mono-, di-, and
trigenotype cultures of Drosophila melanogaster. Zeitschrift fr Zoologische
Systematik und Evolutionsforschung 23, 214-228.
211. Botella LM, Moya A, Gonzlez MC & Mnsua JL. (1985). Larval stop, delayed
development and survival in overcrowded cultures of Drosophila melanogaster: effect
of urea and uric acid. Journal of Insect Physiology 31, 179-185.
 19

212. Moya A, Botella LM & Mnsua JL. (1984). An estimator to study the effect of male
recombination in dysgenic crosses of Drosophila melanogaster. Gentica Ibrica 36,
61-76.
213. Moya A, Barber A & Dopazo J. (1984). Simulation of the larval competition process.
Drosophila Information Service 60, 67-68.
214. Botella LM, Moya A & Mnsua JL. (1984). Effect of butyrate on the development of
D. melanogaster. Drosophila Information Service 60, 67-68.
215. Moya A & Mnsua JL. (1983). Dynamics of larval competition process: the
overfeeding technique in Drosophila. Drosophila Information Service 59, 90-91.
216. Mnsua JL & Moya A. (1983). Stopped development in overcrowded cultures of
Drosophila melanogaster. Heredity 51, 347-352.
217. Castro JA, Moya A & Mnsua JL. (1983). Gene-frequency dependent selection:
analysis of competition among two and three competitors of Drosophila
melanogaster. Drosophila Information Service 59, 25-26.
218. Botella LM, Moya A & Mnsua JL. (1983). Effect of urea on viability and mean
developmental time of Drosophila melanogaster. Drosophila Information Service 59,
23-24.

Philosophy and Science Communication Journal Articles

1. Moya A. (2009). Las peligrosas ideas de Darwin. Teorema XXVIII, 5-13.
2. Moya A. (2009). La evolucin es una teora cientfica. Apuntes de Ciencia y
Tecnologa 30, 13-14.
3. Martnez M & Moya A. (2009). Seleccin natural, creatividad y causalidad. Teorema
XXVIII, 71-94.
4. Moya A. (2008). A propsito de cmo aproximarnos a la Biologa Sinttica para no
llevarnos desilusiones. Actualidad SEM 46, 24-25.
5. Moya A. (2008). Microorganismos y salud. Viure en Salut 78, 8-9.
6. Peret J, Catal J & Moya A. (2008). La synthse dtres vivants. Pour la Science
Juillet-Septembre, 38-52.
7. Moya A, Serra L & Santos M. (2008) La gentica evolutiva en Espaa. Evolucin 3,
31-35.
8. Moya A. (2007). El lenguaje de la evolucin y la ontologa. Ontology Studies /
Cuadernos de Ontologa 7, 98-114.
9. Moya A. (2007). Hombres y cyborgs. Ludus Vitalis XV, 227-230.
10. Moya A. (2007). El genoma mnim. Omnis Cellula 14, 7.
11. Moya A. (2007). Biodiversidad y evolucin: el compromiso tico de nuestra especie.
Evolucin 2, 49-58.
12. Moya A. (2007). Tras un manifiesto por el regreso a la ciencia acadmica. Mtode:
Revista de Difusin de la Investigacin 52, 3-7.
13. Moya A. (2007). En torno a la singularidad humana. Pasajes de Pensamiento
Contemporneo 21-22, 127-132.
14. Moya A. (2006). La superacin del dualismo. Ludus Vitalis XIV, 247-250.
15. Moya A. (2006). Interview on Evolution. Mtode: Revista de Difusin de la
Investigacin 48, 13-17.
16. Moya A. & Navarro J. (2004). El principio antrpico. Mtode: Revista de Difusin de
la Investigacin 40, 17-18.
17. Moya A. (2004). En torno a la suficiencia explicativa de la teora de la evolucin
biolgica por seleccin natural. Ontology Studies / Cuadernos de Ontologa 4, 183-
192.
18. Moya A. (2003). La biologa evolutiva: cuna de constructivas controversias. la Talaya
No. 14. Edicin electrnica trilinge (cataln, espaol, ingls).
19. Moya A. (2003). Lo mnimo para vivir. El Temps 976, 53-55.
 20

20. Moya A. (2003). Una reflexin sobre la melancola del hombre de ciencia. Mtode:
Revista de Difusin de la Investigacin 36, 6-7.
21. Moya A. (2002). Los detectives de los genes. Transversal 17, 25-27.
22. Prez Ortn J, Moya A & Ramn D. (2001). Los otros genomas. Mtode: Revista de
Difusin de la Investigacin 32, 57-60.
23. Moya A. (2001). La biologa evolutiva que viene. Mtode: Revista de Difusin de la
Investigacin 28, 24-26.
24. Moya A. (2000). Francisco J. Ayala. La ciencia es y debe ser patrimonio universal de
la humanidad. Pasajes de Pensamiento Contemporneo 4, 45-51.
25. Moya A. (2000). La imagen social de la ciencia: editorial. Pasajes de Pensamiento
Contemporneo 4, 3-5.
26. Moya A. (2000). Nuevos enfoques en la teora de la evolucin. Ludus Vitalis 8, 25-
34.
27. Moya A. (2000). La gentica de poblaciones y la trazabilidad gentica de la historia
de la vida: el poder de los marcadores moleculares. Ludus Vitalis 7, 157-161.
28. Moya A. (2000). La ciencia y el sentido de la existencia. Pasajes de Pensamiento
Contemporneo 3, 69-74.
29. Moya A. (1999). Gestionando la Biodiversidad. Perfil del Instituto Cavanilles de
Biodiversidad y Biologa Evolutiva. Mtode: Revista de Difusin de la Investigacin
22, 7.
30. Moya A. (1997). Simbiosis y parasitismo. Arbor CLVIII, 333-343.
31. Moya A. (1996). La gnesis recursiva de la complejidad biolgica. Ludus Vitalis IV,
5-16.
32. Moya A. (1996). Biodiversitat per a una Universitat. Mtode: Revista de Difusin de
la Investigacin 15, 19-20.
33. Moya A. & Bracho A. (1995). Los virus de RNA como modelos para el estudio de la
evolucin experimental. Innovacin y Ciencia IV, 38-43.
34. Moya A, Ayala FJ & Fernando Fernndez C. (1995). Introduccin: perspectivas en la
teora de la evolucin. Innovacin y Ciencia IV 9-11.
35. Moya A. (1993). La perplejidad biolgica y la teora evolutiva. Mtode: Revista de
Difusin de la Investigacin. Junio, 14-16.
36. Moya A. (1992). Por qu conservar la diversidad biolgica? Arbor CXLII, 93-100.
37. Lujn JL & Moya A. (1990). El proceso de seleccin natural y la teora de la
evolucin. Arbor Octubre, 99-120.
38. Moya A. (1991). Dos aproximaciones al proyecto Genoma. Arbor Abril, 175-180.
39. Moya A. (1988). Determinismo gentico y evolucin cultural humana. Anthropos 82-
83, 79-80.
40. Moya A. (1985). Clsicos y nuevos enfoques en Filosofa de la Biologa. Contextos
III, 65-74.
41. Moya A. (1983). Biologa y Filosofa de la Biologa. Millars VIII, 61-71.
42. Moya A. (1982). Panorama de la obra de J.H. Woodger en la Biologa
contempornea. Teorema XII, 61-70.

phD theses directed

1. Francy Yolima Elizabeth Carrillo Cruz. 2008. Dinmica experimental de infecciones
mltiples del virus de la estomatitis vesicular (VSV). Universitat de Valncia.
2. Carlos Llorens Candela. 2008. Molecular diversity and evolution of Ty3/Gypsy and
Retroviridae LTR retroelements and their evolutionary relationships with aspartic
peptidases of clan AA. Universitat de Valncia.
3. Iaki Comas Espadas. 2008. Phylogenomics and the evolution of proteobacteria.
Universitat de Valncia.
 21

4. Rafael Sanjun Verdeguer. 2005. Robustez gentica, epistasia y evolucin de los virus
de RNA. Universitat de Valncia.
5. Nuria Jimnez Hernndez. 2004. Evolucin del virus de la hepatitis C en muestras
hospitalarias de la Comunidad Valenciana. Universitat de Valncia.
6. Jose Manuel Cuevas Torrijos. 2003. Anlisis de las restricciones evolutivas durante la
evolucin experimental del virus de la estomatitis vesicular (VSV). Universitat de
Valncia.
7. Maria Alma Bracho Lapiedra. 2003. Caracterizacin molecular y anlisis de la dinmica
poblacional de la recuperacin de eficacia del virus de la estomatitis vesicular.
Universitat de Valncia.
8. Mario Ali Fares Riao. 2002. El papel de la seleccin en la endosimbiosis bacteriana de
insectos. Universitat de Valncia.
9. Rosario Miralles Borrego. 2000. Efecto del tamao y la estructura poblacional en la
evolucin de poblaciones experimentales del virus de la estomatitis vesicular (VSV).
Universitat de Valncia.
10. Celila Buades Gomis. 1997. Estudio de la simbiosis intracelular en los ficos. Evolucin
de la subunidad de la F-ATPasa de Buchnera aphidicola. Universidad de Valencia.
11. Santiago Francisco Elena Fito. 1995. Evolucin de la eficacia biolgica en poblaciones
experimentales del virus de la estomatitis vesicular. Universitat de Valncia.
12. David Martnez Torres. 1994. Caracterizacin molecular y anlisis poblacional de la
variabilidad del DNA mitocondrial del fido Rhopalosiphum padi. Universitat de
Valncia.
13. Adoracin Hernndez Martnez. 1993. Efecto de los cuellos de botella peridicos sobre la
variabilidad de caracteres morfolgicos y cuantitativos de Drosophila pseudoobscura.
Universitat de Valncia.
14. Agust Galiana Soriano. 1993. Especiacin via efecto fundador en Drosophila
pseudoobscura. Universitat de Valncia.
15. Eladio Barrio Esparducer. 1992. Evolucin del DNA mitocondrial del grupo obscura de
Drosophila. Universitat de Valncia.
16. Joaqun Dopazo Blzquez. 1989. Estudio de la variabilidad gentica del virus de la fiebre
aftosa. Universitat de Valncia.
17. Fernando Gonzlez Candelas. 1987. Proceso de competencia larvaria en Drosophila:
Supervivencia, dinmica de mortalidad y tiempo de desarrollo. Universitat de Valncia.