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BIOTECHNOLOGY & THE SOCIETY ■ 1861 Louis Pasteur

Welcome to the World of Biotechnology! - Invented a process that destroys harmful bacteria in milk and
other products but does not affect the taste of the foods or its nutritional
value.
CHAPTER 1
Biotechnology around the World, Biotechnology in the Philippines - This process is called PASTUERIZATION.
■1865 Gregor Mendel

WHAT IS BIOTECHNOLOGY? - A monk and scientist, studied the easily measured traits of peas
such as color, shape and length.
Is simply defined as any biology-based technology which uses organisms or
their parts to make or modify products, or improve plants, animals and - He discovered that the basic laws of genetics but this was largely
microorganisms. unacknowledged until the following century when such laws were
rediscovered by other scientists.

BIOTECHNOLOGY through the YEARS… ■1879 William James Beal

■4000 BC - Developed THE WORLD’S FIRST HYBRID CORN by crossing white


and yellow corn plants which produced yellowish white corn.
- Egyptians discovered the use of yeast to make their bread rise
and to prepare wine. ■1944 Avery, MacLeod and McCarty

- YEAST break down sugar to carbon dioxide and water. The carbon - Established DNA as the hereditary material or the gene.
dioxide makes bread rise, and wine and beverages bubbly.
■ 1950 Barbara McClintock
■ 3000 BC
- Discovered the “JUMPING GENES” in her studies of maize.
- Peruvians started to improve the POTATO. They made it larger and
- Earlier, scientist thought that the gene would always stay in one
able to resist frost.
place but McClintock discovered that jumping genes naturally occur.
- They used different growing techniques and crossbreeding in
■ 1953 James Watson and Francis Crick
improving the potato. The Peruvians thus contributed to developing classic
biotechnology techniques. - Discovered the DOUBLE-HELICAL NATURE OF DNA.
■1763 BC - The double helix structure explains how the DNA could replicate or
produce identical copies of itself, and how the genetic information in the
- Sumerians invented the process of brewing beer.
gene is expressed.
■1683 Antoine van Leeuwenhoek
- This discovery opened up many avenues of study and has affected
- Invented the microscope. almost all aspects of the sciences.

- This invention allowed scientists to study tiny objects, micro-


organisms and even molecules which our naked eyes cannot see.
■ 1973 Stanley Cohen and Herbert Boyer ■1997
- They demonstrated that DNA molecules can be cut with one type - DOLLY the sheep, the FIRST CLONED SHEEP, was born. Produced
of enzyme. by Ian Wilmut and his colleagues at Roslin Institute near Edinburgh,
England.
- They can be joined together using another enzyme and introduced
into the bacteria E. coli where the re-joined DNA can be multiplied. - Dolly was cloned from an udder cell of an adult sheep, the DNA
from the udder cell was transferred into an egg whose nucleus had been
- This is the start of the recombinant DNA technology or genetic removed. The egg was then implanted into a different sheep.
engineering.
■2002
■ 1982
- The human genome was successfully sequenced.
- HUMAN INSULIN produced by bacteria as a result of genetic
engineering became the first product of modern biotechnology to be ■2004
commercially released.
- The area planted with genetically modified crops (herbicide
■ 1987 tolerant soybean. Bt corn and Bt cotton, herbicide tolerant rapeseed)
increased to 81 million ha in 17 countries in the world.
- A crime suspect in the UK was convicted on the evidence of
genetic DNA fingerprinting. ■2005
- Individuals have specific DNA pattern which can differentiate them - Many biotech products to diagnose and treat various diseases and
form others although they will share common patterns with close relatives. to help protect the environment, make crops with better nutritional and
special qualities, are in various stages of development.
■1990
- RECOMBINANT CHYMOSIN produced in E. coli was released
commercially. This enzyme is used to coagulate milk to produce cheese. BIOTECHNOLOGY IN THE PHILIPPINES
■ 1991 ∞ FISH SAUCE or PATIS – the excess fishes were stored in great pots
(clay pots) and added with lots of salt and left it for a while.
- The first transgenic animal, TRACEY, a sheep, was born.
∞ FISH PASTE or BAGOONG – they used small shrimps (as well as some
- Tracey had human genes which enable her to produce human type of small fish in other regions) and store in great pots (clay pots)
therapeutic proteins in her milk.
and also added with lots of salt and left for a while.
■1994 ∞ LAMBANOG – stored coconut water could turn into a warming and
- The FLAVRSAVR™ tomato with delayed ripening trait and higher intoxicating drink. When this turned sour, it makes vinegar or suka.
solids was the first genetically modified crop to be commercially released. ∞ TUBA – a common practice of our ancestors before, is to tap the
■1996 flower buds or inflorescence of the coconut tree or the nipa palm
tree to collect the fresh sap in a bamboo tube and store the
- Several genetically modified or biotech crops were introduced into product.
the market – herbicide tolerant soybean, corn, rapeseed and cotton, and
insect-protected corn and cotton.
Did you know? from DNA, uracil (rather than thymine) in growing RNA chain pairs with
adenine on the opposing DNA.
PIGAFETTA, the writer Magellan brought along in his trip in the 16th century,
recorded that Magellan was gifted with a jarful of ARAK, or distilled liquor COMPLEMENTARY DNA (cDNA) – DNA molecule made as a copy of mRNA;
when he landed in Homonhon in the Visayas. it therefore lacks the introns that are present in genomic DNA. The amino
acid sequence of a protein can be deduced from its cDNA sequence.
TRADITIONAL BIOTECHNOLOGY
COMPLEMENTARY NUCLEOTIDE SEQUENCE – Two nucleic acid strands are
When microorganisms breakdown the sugars in the coconut water or sap, said to be complementary if their sequences form perfect base pairs with
ALCOHOL is produced. each other resulting in a double helix.
Some microorganisms which can withstand high salt condition can break DEOXYRIBONUCLEIC ACID (DNA) – A long molecule composed of two chains
down the proteins in the fish muscles it results into a tasty (and salty) liquid! of nucleotides containing the deoxyribose sugar; the hereditary material in
all organisms except for some viruses.
This process we have described fall under the technology called
FERMENTATION. DNA LIBRARY – A collection of bacterial cultures which have incorporated
different pieces of DNA.
Word Vocabulary in BIOTECNOLOGY
DNA FINGERPRINTING – Identification of individuals through unique DNA
ANTIBODIES – The globulin proteins (also called immunoglobulin) produced patterns.
in the blood of an animal in response to foreign substances.
DNA SEQUENCING – Determination of the sequence of the bases in a strand
BIOSAFETY – The assessment of the impact and safety of products of of DNA.
modern biotechnology or recombinant DNA technology and the
development of policies and procedures and to ensure this. EXON – Part of a eukaryotic gene that consists of DNA coding for a
sequence of nucleotides in mRNA; thus, an exon can encode the sequence
CHROMOSOME – Rod-like structure composed of a very long DNA molecule of amino acids in a polypeptide or protein.
and associated proteins, usually in pairs, that carries part (or all) of the
hereditary information of an organism. GENE – A region of DNA that encodes or ha the information for a discrete
hereditary characteristics, usually corresponding to a single protein or RNA.
CLONE – A group or population of genetically identical cells or organisms This definition includes the complete functional unit – the coding DNA
formed by repeated (asexual) division from a common cell or organism. Also sequences, noncoding regulatory DNA sequences and introns.
applied to the production of genetically identical genes. When used as a
verb, “to clone” means to produce many copies of genetically identified GENETIC ENGINEERING – Deliberate alterations of individual genotypes;
genes, cells or organisms. techniques that allow the introduction of specific gene(s) from the same or
another organism to produce new trait(s).
CLONING VECTOR – Usually a bacteriophage or plasmid that is used to carry
a gene or pieces of DNA into a recipient cell for the purpose of gene cloning GENOME – The totality of genetic information or all of the genes belonging
or gene transfer. to a cell or an organism.

COMPLEMENTARY BASE PAIRING – refers to the precise bonding of GENOMIC DNA – DNA that carries the genetic information of a cell or an
nitrogenous bases in opposing strands of nucleic acids; in DNA, adenine organism. In contrast, cDNA is prepared by reverse transcription from
always pairs with thymine, cytosine with guanine; when RNA is transcribed messenger RNA.
HUMAN REPRODUCTIVE CLONING – Assisted reproductive technology REVERSE TRANSCRIPTASE – Enzyme, present in retroviruses, which makes a
involving the creation of a human being that is genetically identical to double-stranded DNA copy from a single-stranded RNA template molecule.
another human being.
REVERSE TRANSCRIPTION – Synthesis of a DNA from RNA.
HUMAN THERAPEUTIC CLONING – Refers to the generation of human
embryos by somatic cell nuclear transfer, growing the embryo in the culture RISK ASSESSMENT – A process by which hazards to health and environment
to derive the stem cells that can be used for various therapeutic purposes. which can be brought about by the release of a product are identified and
the magnitude and the probabilities of its possible adverse effects
INTRON – Noncoding region of a eukaryotic gene that is transcribed into an determined.
RNA molecule but is then excised by RNA splicing when mRNA is produced.
RNA POLYMERASE – Enzyme that catalyses the synthesis of an RNA
mRNA (MESSENGER RNA) – RNA molecule transcribed from DNA which molecule on a DNA template from nucleoside triphosphate.
specifies the amino acid sequence of a protein. In eukaryotes, mRNA is
produced by splicing RNA from a larger molecule made by RNA polymerase SOMATIC CELL NUCLEAR TRANSFER – A procedure of cloning which involves
as a complimentary copy of DNA. mRNA is translated into protein. the fusion of the cell from DNA donor (the one to be cloned) with an
enucleated by electricity to create an embryo which is then implanted into a
NUCLEIC ACID – RNA or DNA; long chain of nucleotides joined together by surrogate mother through in vitro fertilization. Used in the creation of
phosphodiester bonds. DOLLY the sheep.
NUCLEOSIDES – Compound composed of a purine or pyrimidine base linked STRUCTURAL GENE – Region of DNA that codes for a protein or for an RNA
to either a ribose or a deoxyribose sugar. molecule; as distinct from regions of DNA that regulate gene expression.
NUCLEOTIDE – Building blocks of DNA or RNA, consisting of a nitrogenous STEM CELLS – Cells from embryo and other adult cell sources which are
base, a five-carbon sugar and a phosphate. Or a nucleoside with one or capable of differentiating into different cell types: have the ability to divide,
more phosphate groups joined in ester linkages to the sugar moiety. DNA renew and regenerate.
and RNA are polymers of nucleotides.
TRANSFORMATION – The process of incorporation or integration of DNA
PROMOTER – A nucleotide sequence in DNA to which RNA polymerase into a cell’s genome. Stable transformation indicates that the DNA can be
binds to begin transcription. With the promoter region are regulatory passes on to successive generations. Also refers to the change of normal
elements which determine where and when the gene will be expressed. cells into cancerous ones.
(PCR) POLYMERASE CHAIN REACTION – Technique for amplifying specific TRANSGENIC – Describes a plant or an animal that has stably incorporated
segments or parts of DNA by multiple cycles of DNA polymerization, each one or more genes from another cell or organisms and can pass them on to
followed by a brief heat treatment to separate complementary strands. successive generations.
RECOMBINANT DNA – Any DNA molecule formed by joining DNA segments VACCINE – A preparation, usually consisting of weakened microorganisms of
from different sources. a particular disease, use to inoculate a person to prevent or decrease the
effects of that disease.
RECOMBINATION – The process in which chromosomes or DNA molecules
are broken or cut and the fragments are re-joined to form new VECTOR – An agent (virus or plasmid) used to transmit genetic material to a
combinations. This can occur in the living cell, for example, during crossing cell or organism.
over in meiosis, or in the test tube using purified DNA and enzymes that
break and join or ligate DNA strands.
CHAPTER 2 can result in the propagation of thousands of identical plantlets from a
Advancing the Frontiers of Biotechnology single piece.
- Propagating a plant to produce AN EXACT COPY is called CLONING.
VACCINES and ANTIBODIES
- Both asexual propagation such as grafting and tissue culture are
 VACCINES Cloning Techniques.
- A preparation, usually consisting of weakened microorganism of a Examples of Cloning Techniques
particular disease, used to inoculate a person to prevent or decrease the
effect of that disease.
- Are made of heat-treated (dead) pathogens or mild strains such as
pathogens that cause the disease.
- Now, modern vaccines are made of only parts of the organisms
like the cell wall, or even specific proteins on the cell wall which can
stimulate production of specific antibodies.

 ANTIBODIES
- The globulin proteins (also called immunoglobulins) produced in
the blood of an animal in response to foreign substances.

- Plant breeders now use molecular markers (DNA or protein


PLANT BIOTECHNOLOGY patterns) which increase their efficiency and accuracy in their selection of
 SEXUAL PROPAGATION superior quality materials as well as identify and characterized genotypes.

- Plants are easily propagated by planting their seeds. Plants coming - These are similar to the DNA fingerprinting. Breeding also uses
from seeds may be similar or even different from the source or mother recombinant DNA technology as a tool to introduce new desirable trait(s)
plant. into crops.

 ASEXUAL PROPAGATION
- Some plants can also be grown by just using such as stems ANIMAL BIOTECHNOLOGY
resulting into plants which are exactly the same as the source or the mother ► EMBRYO TRANSFER (ET)
plant.
- is a widely utilized technology for large animals such as cattle,
 TISSUE CULTURE buffaloes or carabaos and goats.
- Cutting of the source of the plant into smaller parts even down to PHILIPPINE CARABAO CENTER-Biotechnology Research Team
the tiny size of the cells, and growing them on nutrients in a flask or bottle
- Nueva Ecija, has successfully produced healthy elite breeds of water
buffaloes (carabao) from the vitro-produced-frozen-thawed embryos.

RECOMBINANT DNA TECHNOLOGY OR GENETIC ENGINEERING


► RECOMBINANT DNA TECHNOLOGY
- Any DNA molecule formed by joining DNA segments from
different sources.
► GENETIC ENGINEERING
- Deliberate alterations of individual genotypes; techniques
that allow the introduction of specific gene(s) from the same or
another organism to produce new trait(s).
► Early 1970 – laboratory which allow the cutting of DNA at specific
sites, joining the DNA pieces together, and introducing the rejoined
DNA in bacteria to be multiplied became available Recombinant
DNA Technology orgenetic engineeringwas launched!
► The new technologies also brought about the ultimate diagnostic
tool to identify human individuals through DNA fingerprinting.
► Genetic engineering has also introduced improved traits in crops
that help the farmer and consumer. This technology will also enable
the use of animal and crops as factories to produce important
health and industrial products.

HUMAN THERAPEUTIC CLONING and STEM CELLS for THERAPHY


► HUMAN REPRODUCTIVE CLONING
- Assisted reproductive technology involving the creation of a
human being that is genetically identical to another human being.
- Animal cells can be cultured from tissues of specific organs like skin, liver, ► HUMAN THERAPEUTIC CLONING
etc. Some types of mammalian cells have been utilized as bioreactors which
produce various health products such as antibodies, and antiviral and - Refers to the generation of human embryos by somatic cell
anticancer interferon through the technique of recombinant DNA nuclear transfer, growing the embryo in culture to derive stem cells that can
technology or genetic engineering. be used for various therapeutic purposes.
CHAPTER 3
The DNA
WHAT IS DNA?
 The DNA is like a string of notes in specific order. This string of notes
become a melody when expressed vocally be a singer or a musical
instruments.
 A DNA consists of a strand (string) of chemical components called
bases joined together by a sugar phosphate background. The double
strands are held together by hydrogen bonds linking specific bases.

► STEM CELLS
- Cells from embryo and other adult cell sources which are capable
of differentiating into different cell types: have the ability to divide, renew
and regenerate.
- Are unprogrammed cells in the human body which have the ability
to change into 220 types of cells. Also described as pluripotent and also
used as human repair kit.
They have the potential to become:
 Bone, Muscle, Cartilage and other special types of cell.
Replacements for organs such as:  DNA strands in the double helix are complementary to each other.
 ADENINE (A) bonds with THYMINE (T).
 Heart, Liver and Skin
 CYTOSINE (C) bonds with GUANINE (G).
These stem cells can also be transplanted back to the donor to
treat diseases which as this time do not have cures such as:  The pairing of the bases is specific and complementary. Thus, one
strand of a DNA is said to be complementary to its partner strand in
 Alzheimer’s, Parkinson’s, heart failures, spinal cord injury, etc.
the double helix and both strands will actually bear the same
Another important potential use of stem cells is for testing genetic information.
new medications for safety and effectiveness.  The resulting daughter DNA molecules are identical to the parental
DNA helix.
EXAMPLE: An anti-tumor drug can be tested on a cancer stem cell
line to test if the drug can stop the cancer cells from growing.  The letters A, T, G and C form the code of life. In the human
genome, there are about 2.9 billion base pairs which are wound into
They are using adult stem cells that can be derived from: 24 bundles called chromosomes.
 About 30000 – 40000 genes are written in the human DNA which
 Umbilical cord, Peripheral blood or bone marrow.
code for the many proteins that help build and maintain our bodies.
 The location of the DNA in the nucleus of a typical cell. Unicellular Specific enzymes produce the pigment that gives the color of our
cells do not have a distinct nuclear body. eyes or the keratin of our hair and nails.
 The double helical DNA in a cell when stretched measures about 2
meters. Genes are portions of the DNA which carry information that Enzymes catalyze specific reactions which contribute to the creation of a
can be carried from generation to generations. trait.

The information in the gene is transferred or transcribed to a


complementary single strand called messenger RNA (mRNA). For mRNA, the
base U (Uracil) is used instead of T. This process is called transcription.
The mRNA travels from the nucleus to the cytoplasm of the cell and
is translated to protein. This is called translation.

The information in the DNA is transcribed to the messenger RNA and then
translated into protein.

The information for a trait is encoded in the DNA called GENE.


 The information for a trait (like the color or pigment of your eyes) is
encoded in the molecule called DNA or deoxyricucleic acid and is
called a gene.
 In a cell, the information for a gene, is expressed into a protein
through a messenger molecule called messenger ribonucleic acid or The information in the DNA is transcribed to the messenger RNA and then
mRNA. translated into protein.
 We call protein the primary gene product.
 Thus, gene s contain instruction for the production of proteins that While a simple trait may be encoded in a single gene, several genes
are involved in different types of activities that make our bodies contribute to and affect complex traits such as human intelligence and crop
function. yield.
Proteins have several types of functions like:
 Providing structure – Muscles
 Facilitating or catalyzing chemical reactions – as Enzymes
 Transporting materials and in communicating with other cells –
Hormones

You familiar with hemoglobin, the protein carrier of oxygen in the


blood.
CHAPTER 4 • SUSPENSION CULTURE – is a type of culture in which single cell or
TECHNIQUES in BIOTECHNOLOGY small aggregates of cell multiply while suspended in agitated liquid
medium. Used in induction of somatic embryos and shoots,
TISSUE CULTURE production of secondary metabolites, in vitro culture mutagenesis,
-(Merriam-Webster Dictionary) selection of mutants and genetic transformation studies.
The process or technique of making body tissue grow in a culture medium • POLLEN CULTURE – is the in vitro technique by which the pollen-
outside the organism. grains (preferably at the microscope stages) are squeezed from the
- Apart from mass multiplication of elites, it also provides the means to intact anther and then cultured on nutrient medium where the
multiply and regenerate novel plants from genetically engineered cells. microspores without producing male gametes.
• SOMATIC EMBRYOGENESIS – is the process of a single or group of
TISSUE CULTURE is widely used in: cells initiating the development pathway that leads to reproducible
o Obtaining disease free plants. regeneration of non zygotic embryos capable of germinating to
o Rapid propagation of plants those are difficult to propagate. form complete plants.
o Somatic hybridization. • POLLEN CULTURE – is the in vitro technique by which the pollen-
o Genetics improvement of commercial plants. grains (preferably at the microscope stages) are squeezed from the
o Obtaining androgenic and gynogenic haploid plants for breeding intact anther and then cultured on nutrient medium where the
programmes. microspores without producing male gametes.
• SOMATIC EMBRYOGENESIS – is the process of a single or group of
Importance of Tissue Culture cells initiating the development pathway that leads to reproducible
 Maximizes the use of space and shortens time regeneration of non zygotic embryos capable of germinating to
 Does not harm mother plant (source plant) form complete plants.
 It is easy to select desirable traits directly from the culture setup (in • PROTOPLAST CULTURE – it is the culture of isolated protoplasts
vitro) which are naked plants cells surrounded by plasma membrane
 Plant tissue culture line can give continuous supply throughout the which is potentially capable of cell wall regeneration, cell division,
year growth and plant regeneration on suitable medium under aseptic
 Time required is shortened condition.
 Plants usually are disease (bacterial, fungal,viral diseases) • SHOOT TIP AND MERISTEM CULTURE – the tips of shoots (which
 Plant tissue banks can be frozen and then regenerated through contain the shoot apical meristem) can be culture in vitro producing
tissue culture clumps of shoots from either axillary or adventitious buds. This
method can be used for clonal propagation.
TYPES of TISSUE CULTURE • EXPLANT CULTURE
• CALLUS CULTURE – defined as production and maintenance of an – There are variety of forms of seed plants, trees, herbs,
unorganized mass of proliferative cell from isolated plant cell, tissue grasses, which exhibit the basic morphology units i.e. root, stem
or organ by growing them on artificial nutrient medium in glass vials and leaves
under controlled aseptic conditions. – Parenchyma is the most versatile of all types of tissues.
• ORGAN CULTURE – refers to the in vitro culture and maintenance of They are capable of division and growth.
an excised organ primordial or whole part of an organ in way and
function.
• SINGLE CELL CULTURE – is a method of growing isolated single cell
aseptically on nutrient medium under controlled condition.

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