Professional Documents
Culture Documents
AND ABSTRACT
PHOTO BY YOYO BUDIMAN
THE 1ST ANNUAL MEETING OF BIODIVERSITAS,
JOURNAL OF BIOLOGICAL DIVERSITY
KAMPUS UNS KENTINGAN SOLO, 22 JULI 2010
THIS PAGE INTENTIONALLY LEFT BLANK
THE 1ST ANNUAL MEETING OF BIODIVERSITAS, JOURNAL OF BIOLOGICAL DIVERSITY
36A SURAKARTA 57126. TEL./FAX. 0271-632450
SEKRETARIAT: PS. BIOSAINS PPS UNS, JL. IR. SUTAMI
PANDUAN ACARA DAN ABSTRACT
THE 1ST ANNUAL MEETING OF BIODIVERSITAS, JOURNAL OF BIOLOGICAL DIVERSITY
(SIMPOSIUM ILMIAH MASYARAKAT BIODIVERSITAS INDONESIA)
Kampus UNS Kentingan Solo, 22 Juli 2010
Penyelenggara:
Program Biosains Program Pascasarjana Universitas Sebelas Maret Surakarta
Jurusan Biologi FMIPA Universitas Sebelas Maret Surakarta
Masyarakat Biodiversitas Indonesia
Biodiversitas, Jurnal of Biological Diversity
PENGANTAR
The 1st Annual Meeting of Biodiversitas, Journal of Biological Diversity ini merupakan pertemuan
pertama para Editor (pengelola), Mitra Bestari, Penulis, dan Pembaca jurnal tersebut. Tujuan utama
kegiatan ini adalah bertukar informasi terbaru mengenai penelitian biodiversitas di Indonesia
khususnya dan di kepulauan Nusantara pada umumnya. Adapun tujuan khusus kegiatan ini adalah
mendapatkan naskah berkualitas dan menerbitkannya pada jurnal Biodiversitas. Sehingga naskah
yang diikutsertakan harus orisinil dan penulisannya mengikuti kaidah Guidance for Authors jurnal
tersebut, termasuk format dan bahasa yang digunakan (Inggris). Kegiatan ini diharapkan dapat
menjadi kegiatan rutin pada tahun‐tahun berikutnya.
Pertemuan ini sekaligus ditujukan untuk memperkenalkan dan menjaring anggota “Masyarakat
Biodiversitas Indonesia/MBI” (Society for Indonesian Biodiversity) yang diinisasi jurnal Biodiversitas
pada awal tahun 2006. Himpunan profesi ini bertujuan untuk meningkatkan upaya penelitian,
perlindungan, dan pemanfaatan biodiversitas secara berkelanjutan.
Pembentukan organisasi yang berbentuk “himpunan profesi” ini perlu dilakukan, karena belum ada
organisasi yang khusus mewadahi bidang keahlian biodiversitas (keanekaragaman hayati). Himpunan
profesi yang ada umumnya spesifik untuk disiplin ilmu tertentu dan bersifat sektoral seperti
kepakaran di bidang tumbuhan, hewan, mikroba, kehutanan, biologi, bahan alam, gulma, dan lain‐
lain; sehingga perlu adanya jembatan yang mampu memfasilitasi komunikasi secara intensif di antara
para pihak dari berbagai bidang ilmu yang terkait dengan biodiversitas. Bidang keahlian
keanekaragaman hayati mencakup keanekaragaman genetik, spesies, ekosistem, dan kultur manusia
dalam memanfaatkan biodiversitas (etnobiologi). Himpunan profesi ini diharapkan dapat
mempertemukan para peneliti dan pemerhati biodiversitas di seluruh Nusantara yang konsisten
menggeluti bidang tersebut dan jumlahnya diyakini cukup banyak.
Pada akhirnya nanti diharapkan seluruh penulis Biodiversitas yang berkewarganegaraan Indonesia
adalah anggota himpunan tersebut, sehingga terjadi sinergi dimana anggota himpunan memiliki
kepastian tempat untuk mempublikasikan naskah ilmiahnya, sebaliknya pengelola jurnal memiliki
kontributor dan pelanggan yang pasti sehingga memudahkan dalam mendapatkan naskah
berkualitas dan menyebarluaskan jurnal.
Kegiatan yang bertajuk The 1st Annual Meeting of Biodiversitas, Journal of Biological Diversity
dilaksanakan pada 22 Juli 2010. Pertemuan ini sekaligus merupakan kegiatan pembuka “International
Conference on Biotechnology and Climate Change” yang dilaksanakan Program Pascasarjana
Universitas Sebelas Maret pada 23‐24 Juli 2010. Tema di atas merupakan tema naskah yang
dipresentasikan pada pertemuan ini, meskipun naskah lain sepanjang sesuai dengan ketentuan jurnal
Biodiversitas tetap dapat dipresentasikan dan diterbitkan.
Surakarta, 19 Juli 2010
1
DAFTAR ISI
PENGANTAR – 1
PETA LOKASI [1]: KOTA SOLO – 3
PETA LOKASI [2]: GEDUNG PASCASARJANA UNS SOLO – 4
JADWAL ACARA – 5
DAFTAR PEMAKALAH DAN MITRA BESTARI – 6
ABSTRACT – 8
DAFTAR PESERTA, PEMAKALAH, PANITIA – 27
DAFTAR ANGGOTA MBI – 32
2
PETA LOKASI [1]
KOTA SOLO
SOLO
UNS
3
PETA LOKASI [2]
GEDUNG PASCASARJANA UNS SOLO
PPs
UNS
PINTU
DEPAN
DIBUAT: PANITIA IMPAS
.
4
JADWAL ACARA
Kamis, 22 Juli 2010
Waktu Kegiatan
08.00‐08.30 Registrasi
08.30‐09.00 Pembukaan dan Sambutan‐sambutan
09.00‐09.15 Rehat kopi
09.15‐10.45 Development of international journal insight editorial board and peer reviewer
of several overseas (international) journals
Strategi manajemen Biodiversitas dalam era internasionalisasi dan Pembentukan
Masyarakat Biodiversitas Indonesia
10.45‐12.15 Sidang paralel R1 Sidang paralel R2
Pemakalah: Pemakalah:
Alfonds Andrew Maramis Deden Mudiana
Yaya Ihya Ulumuddin Rofiq Sunaryanto
Dwi Hastuti Charis Amarantini
Agus Sudibya Jati Kristamtini
YohanesYoseph Rahawarin R. Susanti
12.15‐13.30 Ishoma
13.30‐15.00 Sidang paralel R1 (lanjutan) Sidang paralel R2 (lanjutan)
Pemakalah: Pemakalah:
Lily Surayya Eka Putri Agung Kurniawan
Serafinah Indriyani Mera Wulandari
Siti Sofiah Nina Dwi Yulia
Titut Yulistyarini Dewi Ayu Lestari
Sri Wilujeng
15.00‐15.30 Rehat kopi
15.30‐16.00 Penutup
5
DAFTAR PEMAKALAH DAN MITRA BESTARI
R1
Anon.
No Title Presenter Reviewer 1 Reviewer 2
Reviewer
1. The distribution of benthic Alfonds Andrew Dr. Ir. Lily Surayya Siti Sofiah, S.P. Ada
macroinvertebrate in Kreo River, Maramis Eka Putri,
Semarang, and its potency as M.Env.Stud.
bioindicator of Jatibarang landfill
leachate pollution
2. Wood density as a constant of Yaya Ihya Alfonds Andrew Ir. Dwi Hastuti, M.P. Ada
allometric equation on carbon Ulumuddin Maramis, S.Si., M.Si.
stock estimation of mangrove
biomass
3. Vegetation classification based on Dwi Hastuti Dra. Serafinah Alfonds Andrew Ada
the structure and composition of Indriyani, M.Si. Maramis, S.Si.,
vegetation using cluster analysis M.Si.
method in the Gunung Merbabu
National Park, Central Java
4. Distribution and diversity Agus Sudibya Jati Dra. Serafinah Teguh Pribadi, M.Si. Ada
Herpetofauna in Merbabu Indriyani, M.Si. Siti Sofiah, S.P.
Mountain National Park Area,
Central Java
5. Forest land use by the community YohanesYoseph Dr. Ir. Lily Surayya Ir. Dwi Hastuti, M.P. Ada
in Sorong Natural Tourism Park at Rahawarin Eka Putri,
Sorong City, West Papua M.Env.Stud.
6. Diversity of coral reefs in Badul Lily Surayya Eka Agus Sudibya Jati Ir. Titut Yulistyarini, Belum
Island Waters, Ujung Kulon Putri M.P.
7. A model of relationship between Serafinah YohanesYoseph Ir. Titut Yulistyarini, Sudah
climate and soil factors related to Indriyani Rahawarin, S.Hut., M.P.
oxalate content in porang M.Sc.
(Amorphophallus muelleri Blume)
corm
8. Vegetation diversity of land use Siti Sofiah Dr. Ir. Sri Wilujeng, Yaya Ihya Belum
system in recharge area of Seruk M.Si. Ulumuddin, S.Si.,
Spring, Batu: litter thickness and M.Si.
quality, earthworms population,
soil porosity
9. Valuing quality of vegetation in Titut Yulistyarini Dr. Ir. Sri Wilujeng, Yaya Ihya Belum
recharge area of Seruk Spring, M.Si. Ulumuddin, S.Si.,
Pesanggrahan Valley, Batu City M.Si.
10. The effects of forest burning and Sri Wilujeng YohanesYoseph Agus Sudibya Jati Belum
logging toward regeneration Rahawarin, S.Hut.,
ability of sowang (Xanthostemon M.Sc.
novaguineense Valet.) in Cycloop
Mountain, Jayapura, Papua
6
R2
Anon.
No Title Presenter Reviewer 1 Reviewer 2
Reviewer
11. The flower and fruit Deden Mudiana Mera Wulandari, Ir. Kristamtini, M.Si. Ada
development of Syzygium S.Si.
pycnanthum Merr. & L.M. Perry
12. Screening of marine Rofiq Sunaryanto Charis Amarantini, Deden Mudiana, Sudah
Actinomycetes of Banten west M.Si. S.Hut.
coast and purification of their
antibiotic
13. Identification and Charis Dr. Drh. R. Susanti, Deden Mudiana, Ada
characterization of Salmonella Amarantini M.P. S.Hut.
typhi isolates from the patients
infected by typhoid fever in
Southwest Sumba Regency, East
Nusa Tenggara based on 16S
rRNA gen sequences and its
public health implications
14. Identification of some varieties Kristamtini Dr. Drh. R. Susanti, Agung Kurniawan, Sudah
of mango with Random M.P. S.Si.
Amplified Polymerase DNA
(RAPD)
15. Polymorphic sequence in the R. Susanti Rofiq Sunaryanto, Utaminingsih, S.Si. Ada
ND3 region of Java island M.Si.
endemic of Ploceidae bird
mitochondrial DNA
16. Species diversity of Agung Kurniawan Charis Amarantini, Dewi Ayu Lestari, Belum
Amorphophallus (Araceae) in M.Si. S.P.
Bali and Lombok with species
attention to genetic study in A.
paeoniifolius (Dennst.) Nicolson
17. Anatomy and morphology Mera Wulandari Esti Endah Ariyanti, Ir. Kristamtini, M.Si. Belum
character of five Indonesian M.Sc.
banana cultivars (Musa spp.)
based on their ploidy level
18. Study on epiphytic orchid Nina Dwi Yulia Mera Wulandari, Agung Kurniawan, Belum
diversity and its host tree at S.Si. S.Si.
Gunung Manyutan Forest
Reserve, Wilis Mountain,
Ponorogo, East Java
19. Inventory of orchids species in Dewi Ayu Lestari Rofiq Sunaryanto, Nina Dwi Yulia, S.Si., Sudah
Lamedai Natural reserve, Kolaka, M.Si. M.Si.
Southeast Sulawesi
7
ABSTRACT
01
The distribution of benthic macroinvertebrate in Kreo River, Semarang, and
its potency as bioindicator of Jatibarang landfill leachate pollution
Alfonds Andrew Maramis1*, Augustinus Ignatius Kristijanto2
1
Biology Department, Faculty of Mathematics and Natural Science, State University of Manado
(UNIMA), Kampus UNIMA at Tondano, Minahasa, 95618, North of Sulawesi, Tel.: +62‐431‐321945,
321846, 321847, Fax.: +62‐431‐321866, email: alfondsm@yahoo.com
2
Chemistry Department, Science and Mathematics Faculty, Satya Wacana Christian University
Address: Jl. Diponegoro 52‐60, Salatiga, 50711, Central of Java, Phone: (0298) 321212, Facs: (0298)
321433
ABSTRACT
Waste storage process at the Jatibarang landfill, Semarang, produce leachate that comes into the
water body of Kreo River. Several studies have reported about changes in the biotic community
structure of a river as a response to landfill leachate discharge. Based on this background, this
research aims to determine the distribution of benthic macroinvertebrate in Kreo River, and also to
determine the sensitivity or tolerance of the biota against landfill leachate pollution. This study was
designed using randomized block design with the independent variables are sampling stations and
the dependent variable is the amount of each of the identified taxa of benthic macroinvertebrate
per‐surface area of box sampler (diameter = 16 cm). Samples were collected at four stations on the
Kreo River. The first station located next to ±150 m upstream from the point of discharge of leachate.
The second, third, and fourth station respectively to be about 1, 500, and 3000 m downstream from
the point of discharge of leachate. The identified taxa data were analyzed first by descriptive
statistics followed by Kruskal‐Wallis test (α = 0.05). The distribution of benthic macroinvertebrate in
Kreo River near the effluent of the leachate followed the contagious pattern. Some benthic species
such as Baetis sp1., Choroterpides exigua, and Hydropsyche sp., showing sensitivity to landfill
leachate pollution, otherwise the species Liebebiella deigma show tolerance.
Keywords: Benthic macroinvertebrate, bioindicator Jatibarang landfill, Kreo River, leachate.
Running title: Benthic macroinvertebrate as bioindicator of leachate pollution
8
02
Wood density as a constant of allometric equation on carbon stock
estimation of mangrove biomass
YAYA IHYA ULUMUDDIN
Research Center for Oceanography, Indonesian Institute of Sciences (PPO, LIPI), Jl. Pasir Putih I No.1
Ancol Timur, Jakarta Utara 14430, Indonesia, Tel. +62‐21‐64713850, Fax. +62‐21‐64711948, Email:
yaya_lipi@yahoo.com
ABSTRACT
Wood density is an important variable because it tells how much carbon the plant allocates into
construction costs. So, it is used as a constant in allometric model to reduce uncertainty of carbon
stock estimation in mangrove biomass. For mangrove species, wood density differs significantly
between species, but less for individuals within species. On the other hand, it was found that wood
density differs between individuals within species in other literature. Therefore this paper will
present wood density study for mangrove species in Pari Islands, Kepulauan Seribu Regency. To
investigate that there is variability in wood density between individuals within species, 41 wood
samples of Rhizophora stylosa Griff. was drilled from three kinds of tree with various diameter (D)
and four locations. By using two factorials ANOVA, it was concluded that the wood density did not
differ significantly between samples (P>0.05).
Keywords: wood density, constant, allometric, carbon stock
Running title: Wood density as a constant of equation
9
03
Vegetation clasification based on the structur and composition of vegetation
using cluster analysis method in the Gunung Merbabu National Park
DWI HASTUTI , DJOKO MARSONO2, IRHAM3, SUMARDI2
1♥
1
The Stabilization Office of Forest Area XI, Ministry of Forestry, Jl. Ngeksigondo Street 58 Kotagede,
Yogyakarta 55178, Indonesia, Tel./Fax.:+62‐274‐451880, Email: tutidwi@hotmail.com
2
Faculty of Forestry, Gadjah Mada University, Yogyakarta 55284
3
Faculty of Agriculture, Gadjah Mada University, Yogyakarta 55284
ABSTRACT
The aim of the research was to identify the structure and the composition of vegetation by clustering
the ecological unit of forest area in the Gunung Merbabu National Park. The establishment of the
ecological units were determine overlaying of slope gradient, crown density, and land type maps.
Sixty nine ecological units were obtained 226 sample plots for each sample plot were set up
sistematically. These ecological units were subjected to cluster analysis using Minimum Variance
Clustering (Ward linkage) method and Euclidien Distance Measurement (EDM). The cluster analysis
resulted nine clusters, i.e. cluster I and K (no trees), cluster L (one species), cluster P (11 species),
cluster J ( two species), cluster M and E (twelve species), cluster O (eleven species), cluster F (one
species), each of which was dominated by Pinus merkusii (IVI 300%); P. merkusii (IVI 121%) and
Cupressus sempervirens (IVI 81%); P. merkusii (IVI 251%) and Albizzia lophanta (49%); P. merkusii (IVI
159%) and C. sempervirens (IVI 36%); P. merkusii (285%) and A. lophanta (IVI 17%); P. merkusii (IVI
218%) and C. sempervirens (IVI 24%); P. merkusii (IVI 300%) respectively. The law value diversity,
evenness and richness indexes of each cluster indicates that the heterogenitas the cluster
vegetations are low.
Keywords: Cluster Analysis, Ecological Unit, Importance value (IVI).
10
04
Distribution and diversity of Herpetofauna in Merbabu Mountain National
Park area, Central Java
SUBENO, BAYU WISNU BROTO, AGUS SUDIBYO JATI
Department Forest Resource Conservation, Faculty of Forestry, Gadjah Mada University. Jl. Agro, No.
1, bulaksumur, Yogyakarta. 55281. tel. 0274‐512102, fax. 0274‐550541. email: wishben@yahoo.com
ABSTRACT
As a new national park, Marbabu Mountain National Park has not any data about the
potential biophysical and socio‐economic. In the case of potential biophysical excavation, potential of
fauna in TNGM especially herpetofauna needs to be done. So far study of herpetofauna has not been
conducted. Specific purpose of this study was to determine the distribution and diversity of
herpetofauna in the area of MMNP. While long‐term goal is to provide a data base of the
herpetofauna, especially in the area MMNP so that could be one consideration in the management
area. Methods to be used in this study were Visual Encounter Survey (VES) with transect. Type of
data collected is the data species and habitat. To find out herpetofauna species diversity the
Shannon‐Wiener diversity index was used. Distribution made by processing the coordinates using
ArcView 3.3. Research results showed that of all the study sites as many as 9 species of herpetofauna
were found consisting of 2 reptile species and 7 amphibian species. The Ranidae family dominated in
amphibian species by 4 species, and for Megophrydae, Microhylidae, and Rhacophoridae families
each consisting of one type. Both reptile species found came from 2 distinct families, Agamidae and
Gekkonidae. The Herpetofauna diversity index in MMNP has a value 1 which is categorized as low.
Herpetofauna species distribution varies. There are four species Rana hosii, Rana chalconata,
Lymnonectes kuhlii and Cyrtodactylus marmoratus spread out in three observation locations. Species
that were found in two locations these being Huia mansonii and Megophrys Montana While
Broncocela cristatela, Rhacophorus javanus, and Microhyla Achatina were only found in one location.
Keywords: Merbabu Mountain National Park, herpetofauna, species composition, diversity index,
distribution
11
05
Forest land use by the community in Sorong Natural Tourism Park at Sorong
City, West Papua Province
YOHANES YOSEPH RAHAWARIN
Faculty of Forestry, the State University of Papua (UNIPA), Jl. Gunung Salju, Amban‐Manokwari
98314, West Papua, Indonesia, Tel & Fax.: +62‐986‐211364, Email: yohanesrahawarin@yahoo.com
ABSTRACT
The aim of the research was to: (i) identify the type and extent of forest land use alteration at
Sorong Natural Tourism Park (or SNTP), (ii) investigate society activities that cause forest land use
alteration, and (iii) make the zoning level of environmental damage (iv) investigate the causative
factors of forest land use alteration at SNTP. The method used was survey with field observation and
semi‐structural interview techniques. Data used in this research are secondary and primary data. The
primary data of biophysical aspects consist of type and extents of land usage by society; while data of
socio‐cultural aspects consist of level of community dependency upon land and the existing of local
institution and management of SNTP. Secondary data that had been collected consist of study results
documentation and report of SNTP management aspects. Data were analyzed by using (i) qualitative
descriptive analysis of society socio‐cultural and management aspects, (ii) spatial analysis of
biophysical aspects, and (iii) environmental analysis of biophysical, socio‐cultural and management
aspects. Evaluation of environmental analysis was used to arrange directive and environmental
management strategy at SNTP. Result of research indicated that since its establishment in 1981 to
2009, SNTP forest land utilizing for settlements, forest product extraction and shifting cultivation
activity by society had been cause of land use alteration occurred which was incompatible with area
function about 11,53%. Changing in the land use caused by society activities in land utilizes such
settlements, forest product extraction and shifting cultivation. Level of environmental degradation in
the catchments area of damage SNTP level indicates that 8.01% of total of land area is in slightly
damaged, 2.36% is in moderate damaged and 1.16% is in heavily damaged. Inadequate support on
socio‐cultural aspects of society at SNTP and the lack of founding and supervising upon SNTP
management was pointed as causative factors on environmental damage. Based on level of
environmental damage, community based forest management system will be able to be
implemented as environmental management strategy at SNTP.
Keywords: forest land use, environmental degradation, and Sorong Natural Tourism Park.
12
06
Diversity of coral reefs in Badul Island Waters, Ujung Kulon
Lily Surayya Eka Putri, Apep Fry Hidayat
Department of Biology Faculty of Science and Technology, State Islamic University (UIN) Syarif
Hidayatullah Jakarta, Jl. Ir. H. Djuanda no.95 Ciputat 15412, Tel: +62‐21‐7493606, Fax: +62‐21‐
7493315, Email: lsurayya@yahoo.com
ABSTRACT
The study was conducted at West Badul Island waters to identify biodiversity of coral reefs, located
at Ujung Kulon district, West Java. Variable observed were biodiversity and level of mortality related
to environmental condition surrounding location of study. Sampling method used was line intercept
transect method (LIT method) in 75 m lenghth. There were 3 point sampling with 25 m distance
straight to the sea with 3 replication. The results showed that the average of coral cover which was
still alive was 72,53% with mortality index was 0,265. Neverthelles, diversity index of coral showed at
moderate level, with low level condition of domination index.
Keywords: Coral reef, biodiversity, mortality index, Badul Island
13
07
A model of relationship between climate and soil factors related to oxalate content in
porang (Amorphophallus muelleri Blume) corm
Serafinah Indriyani12, Endang Arisoesilaningsih2, Tatik Wardiyati3, Hery Purnobasuki4
1
Post‐graduate program, Program Study of Mathematics and Natural Sciences, Airlangga University,
Surabaya 60115, East Java, Indonesia
² Biology Department, Faculty of Mathematics and Natural Sciences, Brawijaya University, Jl. Veteran,
Malang 65145, East Java, Indonesia. Tel. & Fax.: +62‐341‐575841. E‐mail: s.indriyani@ub.ac.id
3
Agronomy Department, Faculty of Agriculture, Brawijaya University, Malang 65145, East Java,
Indonesia
4
Biology Department, Faculty of Science and Technology, Airlangga University, Surabaya 60115, East
Java, Indonesia
ABSTRACT
The objective of the research was to obtain a model of relationship between climate and soil factors
related to oxalate content in porang corm. Porang corms were collected from five locations of
porang agroforestry in East Java. The locations were (i) Klangon Village, Saradan Subdistrict, Madiun
Regency; (ii) Klino Villlage, Sekar Subdistrict, Bojonegoro Regency; (iii) Bendoasri Village, Rejoso
Subdistrict, Nganjuk Regency; (iv) Sugihwaras Village, Nggluyu Subdistrict, Nganjuk Regency and (v)
Kalirejo Village, Kalipare Subdistrict, Malang Regency. Geography variable consist of altitude. Climate
variables consist of percentage of radiation, temperature and rainfall. Soil variables consist of
electrical conductivity, pH, soil specific gravity, soil organic matter, available of calcium, and cation
exchange capacity (CEC). Vegetation variables consist of species of plant tree and percentage of
coverage. Porang vegetative growth variables consist of plant height, number of bulbil, canopy
diameter, and petiole diameter. Corm variables consist of corm diameter, corm weight, and corm
specific gravity. Oxalate variables consist of total oxalate, soluble oxalate, insoluble oxalate, and
density of calcium oxalate crystal. Oxalate contents were measured based on AOAC method. All of
variables were collected from first to fourth growth period of porang. Data were analyzed by
smartPLS (Partial Least Square) software. The results showed that there were significantly direct
effect between altitude and temperature, altitude and CEC of soil, temperature and CEC of soil,
altitude and percentage of coverage, temperature and percentage of coverage, CEC of soil and
percentage of coverage, CEC of soil and petiole diameter, petiole diameter and corm diameter, and
petiole diameter and corm oxalate content. There were no significantly direct effect among altitude,
temperature, percentage of coverage and petiole diameter; and among corm total oxalate, soluble
oxalate, insoluble oxalate, and density of calcium oxalate crystal and corm diameter. The value of
Goodness of Fit of the developing model was R²=0.99.
Keywords: corm, climate, model, oxalate, smartPLS, porang, soil.
14
08
Vegetation diversity of land use system in recharge area of Spring Seruk, Batu
City, East Java: litter thickness and quality, earthworms population, soil
porosity
Abban Putri Fiqa1, Siti Sofiah2
Purwodadi Botanical Garden, Indonesian Institute of Sciences (LIPI), Jl. Raya Surabaya‐Malang Km. 65,
Purwodadi‐Pasuruan 67163, East Java, Indonesia, Tel./ Fax.: +62‐341‐426046, +62‐341‐615033, Email:
1
abbanpf@gmail.com, 2 sofie2291@yahoo.com,
ABSTRACT
Vegetation contributes to the litter thickness and quantities. This research was carried out on the
water recharge area of spring Seruk , Batu , aims to determine the effect of land cover on the
thickness and quality of litter and earthworm populations. Some land cover in the recharge area of
spring consisting Seruk natural forest area, land cover of Eucalyptus, pine and bamboo. Litter
biomasses were measured on each plot of land cover with a size of 0.5 cm x 0.5 cm. Then the weight
of wet and dry weight of litter counted. Earthworm biomass and the number counted in each plot of
land cover using iron measuring 20 cm x 20 cm x 10 cm, at each soil depth 0‐10 cm, 10‐20 cm and 20‐
30 cm. The results indicated that the thickness of the most high is bamboo and high quality litter that
is owned by forest land cover (Polyphenols 2.45% and 28.39% lignin) and bamboo (2.43%
polyphenols, 16.39% lignin), while the lowest litter quality are owned by land cover of Eucalyptus
(20.05% polyphenols and lignin 2.64%). Earth worms biomass and the highest density of land owned
by the cover of Eucalyptus with the respective value of 123.75 g m‐2 and 150 individuals m‐2.
Keywords: litter thickness, litter quality, earthworms, spring recharge area, soil porousity
Running title: Vegetation diversity of land use system in Seruk Spring.
15
09
Valuing quality of vegetation in recharge area of Seruk Spring, Pesanggrahan
Valley, Batu City
Titut Yulistyarini, Siti Sofiah
Purwodadi Botanic Garden, Indonesian Institute of Sciences, Jl. Raya Surabaya‐Malang Km. 65,
Purwodadi, Pasuruan 67163, East Java, Indonesia, Tel.: +62 341 426046; Fax.: +62 341 426046Jl; *e‐
mail: tyulistyarini@yahoo.com
ABSTRACT
A Seruk spring is one of the springs in Batu city which has debit less than 1 liter per second.
Land use changes of Seruk spring recharge area were occured in 2001. Recharge area of Seruk Spring
consists of forests, Eucalypts plantations, Bamboo forests, Pine plantations, horticulture and
housing. The aim of this research to valuing the quality of vegetation which supported ground water
recharge in Seruk spring. Quality of vegetation were determined by stratification, diversity, density,
Shannon‐Wiener Diversity Index and the thickness of litter each land use systems. Forests and
Bamboo forests had higher quality of vegetation than Eucalypt and Pines plantations.
Keywords: Vegetation quality, recharge area, Seruk spring, Batu city
Running title: Quality of vegetation in recharge area of Seruk Springs
16
10
The effects of forest burning and logging toward regeneration ability of
Sowang (Xanthostemon novaguineense Valet.) in Cycloop Mountain,
Jayapura, Papua
Sri Wilujeng
Biology Program, Mathematics and Basic Science Education Department, Education Faculty
Cendrawasih University Jalan Raya Sentani – Abepura 99667 Papua Indonesia
Telp. (0967) 582806; 587713 Email: sriwilujeng@yahoo.co.id
ABSTRACT
Sowang (Xanthostemon novaguineense Valet.) is an endemic plant of New Guinea Island, which is
threatened by human activities through land conversion, forest burning and logging. This research
aims to know the Sowang developmental phase and stem branching, seedling dominance level, and
effect of environmental factor alteration towards the amount of Sowang seedlings at burning and
logging areas, and natural forest as control parameters. Sowang stem, derived from shoot of burning
area, grows branchy from the lower part of stem. Sowang stem derived from seed grows
monopodially. Sowang seedling, derived from stem shoot of burning area, have already started
flowering phase that occurs all seasons. Individual of Sowang, derived from seed of logging area and
natural forest, are flowered on the tree level once a year. Sowang seedling became dominant species
at burning area. Environmental factor which are affecting Sowang seedling population density are
crown covering and light intensity.
Keywords: population, Sowang, branching, flowering, domination.
Running title: Regeneration ability of Xanthostemon novaguineense
17
11
The flower and fruit development of Syzygium pycnanthum Merr. & L.M.
Perry
Deden Mudiana*, Esti Endah Ariyanti **
Purwodadi Botanical Garden, Indonesian Institute of Sciences (LIPI), Jl. Raya Surabaya‐Malang, Km 65,
Purwodadi, Pasuruan 67163, East Java, Indonesia, Tel./Fax.: (0341) 426046, Email:
*dmudiana@yahoo.com, **estimudiana@yahoo.com
ABSTRACT
Flower formation is a process of a flowering plant in order to produce the next generation. A flower
plays a major role in pollination and fertilization as early stage of fruit and seed formation. Syzygium
pycnanthum Merr. & L.M. Perry is a member of family Myrtaceae or known as ‘Jambu‐jambuan’
family. The research aimed to observe the development process of its flowering and fruiting phase at
Purwodadi Botanic Garden. It has been noted that this species has ten (10) stages of flower and fruit
development. These stages require 80‐89 days, starts from the emerging of flower bud to ripe fruit.
Keywords: Syzygium pycnanthum, flower and fruit development
18
12
Screening of marine Actinomycetes of Banten west coast and purification of
their antibiotic
Rofiq Sunaryanto , Bambang Marwoto , Tun Tedja Irawadi2, Zainal Alim Mas’ud 2, Liesbetini
1,2 1
Hartoto2
1
Center of Biotechnology BPPT, PUSPIPTEK, Serpong, Tangerang Selatan, Banten 15340 Indonesia
Telp/Fax.+62 21 7560208, email: rofiqsn@yahoo.com
2
Graduate School of Bogor Agriculture University (IPB), Kampus IPB Darmaga, Bogor. 16680
Indonesia
ABSTRACT
Isolation and purification of active compounds produced by marine Actinomycetes has been carried
out. Marine sediment samples were obtained from six different places at Anyer, Banten West Coast
in October 20, 2007. Isolation was carried out using two methods pretreatments, acid treatment and
heat shock treatment. A total of 29 Actinomycetes isolates were obtained from the various sediment
samples collected, then tested for antimicrobial test against Escherichia coli ATCC 25922,
Staphylococcus aureus ATCC25923, Pseudomonas aeruginosa ATCC27853, Bacillus subtilis ATCC
66923, Candida albicans BIOMCC00122 and Aspergillus niger BIOMCC00134. Isolate A11 showed the
most active to Gram‐positive and Gram‐negative bacteria. Morphology and identification test using
16S rRNA showed that isolate A11 is Streptomyces sp. Production of active compound from isolate
A11 used yeast peptone medium. Purification of active compound was carried out using silica gel
column chromatography and preparative HPLC. The single peak of active compound was detected by
HPLC and showed retention time on 8.35 min and maximum absorbance UV visible of antibiotic was
210 nm and 274.5 nm. Active purified compound showed inhibition activity to Gram‐positive and
Gram‐negative bacteria. Minimum inhibitory concentration (MIC) to Escherichia coli ATCC 25922 was
27 µg/mL, Pseudomonas aeruginosa ATCC 27853 68.7 µg/mL, Staphylococcus aureus ATCC 25923
80.2 µg/mL, and Bacillus subtilis ATCC 66923 73.7 µg/mL.
Keywords: marine Actinomycetes, isolation, screening, antimicrobial activity, minimum inhibitory
concentration.
Running title: Marine Actinomycetes screening and their antibiotic
19
13
Identification and characterization of Salmonella typhi isolates from the
patients infected by typhoid fever in Southwest Sumba Regency, East Nusa
Tenggara based on 16S rRNA gen sequences and its public health implications
CHARIS AMARANTINI1*), LANGKAH SEMBIRING 2, HARIPURNOMO KUSHADIWIJAYA3, WIDYA
ASMARA 4
1. Faculty of Biology, Duta Wacana Christian University. Jl. Dr. Wahidin Sudirohusodo No. 5‐27,
Yogjakarta 55224, Telepon : (0274) 563929, Fax : (0274) 4513235, email: charis@ukdw.ac.id
2. Faculty of Biology, Gadjah Mada University, Yogyakarta 55284
3. Field Epidemiology Training Program, Department of Public Health, Faculty of Medicine,
Gadjah Mada University, Yogyakarta 55284.
Department of Microbiology, Faculty of Veterinary Medicine, Gadjah Mada University,
Yogyakarta 55284.
ABSTRACT
The incidence rate of typhoid fever in the Southwest Sumba Regency East Nusa Tenggara is
approximately about 725/ 100,000. In spite of such rate, there is not much yet known about the
molecular epidemiology of the disease. Thus, having accurate data and a strong discriminatory
ability is crucial to scrutinize the molecular epidemiology of S. typhi with a molecular phylogenetic
approach based on 16S rRNA gen sequences. Sixteen representative isolates of S. typhi from different
geographical regions in Southwest Sumba Regency along with the reference strain S. typhi NCTC 786
have been identified and characterised with 16S rRNA gen sequences using PCR amplification and
sequencing. The 16S rRNA sequence data are aligned with the corresponding available S. typhi
sequences retrieved from the NCBI database by using CUSTAL X software. Phylogenetic trees are
generated with PHYLIP software package. Molecular phylogenetic analysis indicates that all the
isolates belong to S. typhi species suggesting by their relatedness with the type strain of S. typhi
ATCC19430T. It is also evident that the isolates which belong to S. typhi species form several different
centers of diversity within the 16S rRNA gene tree. Each clade consists of the strains from different
geographical places in the regency. Thus, to conclude the inquiry, there is evident inter‐geographical
spread of the strains and it tends to spread further into more remote areas in the regency.
Keywords: Salmonella typhi strains, typhoid fever, 16S rRNA gene sequences, molecular phylogenetic
analysis
20
14
Identification of Some Varieties of Mango with Random Amplified
Polymerase DNA (RAPD)
KRISTAMTINI, PRAJITNO AL KS
Balai Pengkajian Teknologi Pertanian (BPTP) Yogyakarta, Jl. Rajawali No 28 Demangan Baru
Yogyakarta, Telp. (0274) 884662 Fax. (0274) 447705, email: krisniur@yahoo.co.id
ABSTRACT
Yogyakarta Special Region has a diversity of agricultural genetic resources and are extremely
different plant variabilities. One of these genetic resources are mango malam. Mango malam has a
special orange‐colored fruit such as honey‐like color (the inside) and the outer skin color of bright
yellow, non fibrous flesh and ndalu sweet taste (cooked well). It is true that mango malam
morphologicall different with mango. To prove that genetically difference it is necessary to identify
using the techniques of molecular biology. The study was conducted in order to identify the
distinctive features of five types of mango such as Arumanis, Golek, Manalagi, malam lumut and
Malam. Random Amplified Polymerase DNA (RAPD). Technique is used to multiply a single primer
random DNA fragments. The results indicated that mango malam has different properties of
morphology and DNA comparated to other varieties of mango such as malam lumut, Arumanis,
Manalagi and Golek. Therefore, mango malam is eligible to be released as national variety due to the
face that mango malam is morphologically and genetically different from the other types of mango.
Keywords: mango malam, variety, manggoes, RAPD
21
15
Polymorphic sequence in the ND3 region of Java island endemic of pPloceidae
bird mitochondrial DNA
R. Susanti
Department of Biology, Faculty of Mathematics and Natural Sciences, Semarang State University, Jl.
Sekar Gading Barat No. 8, Kalisegoro, Gunungpati, Semarang 50229, Central Java, Indonesia. Tel &
Fax. ........ email: rsant_ti@yahoo.com
ABSTRACT
As part of biodiversity, Ploceidae bird family must be kept away from extinction and degradation of
gene‐diversity. This research was aimed to analyse ND3 gene from mitochondrial DNA of Java Island
endemic of Ploceidae bird. Each species of Ploceidae birds family were identified based on their
morphological character, then the blood sample was taken from the birds nail vein. DNA was isolated
from blood using Dixit method. Fragment of ND3 gene was amplified using PCR method with specific
primer pairs and sequenced using dideoxy termination method with ABI automatic sequencer.
Multiple alignment of ND3 nucleotide sequences were analyzed using ClustalW of MEGA‐3.1
program. Estimation of genetic distance and phylogenetic tree construction were analyzed with
Neighbor‐Joining method and calculation of distance matrix with Kimura 2 –parameter. The result of
Java Island endemic of Ploceidae bird family exploration showed that Erythrura hyperythra and
Lonchura ferruginosa can not be found anymore in nature, but the Lonchura malacca that are not
Java island endemic actually found. Nucleotide sequence of mitochondrial ND3 gene of Ploceidae
bird family showed a quite high polymorphism, with 122 substitution from 334 nucleotides analyzed.
Phylogenetic tree of nucleotide sequence of Ploceidae bird family formed 2 cluster. One cluster
consisted of the Ploceus hypoxanthus, Ploceus philippinus, Ploceus manyar and Passer montanus, and
the others species bird of this study include in the seccond cluster. ND3 gene sequence data from
this Ploceidae families need to be analyzed further research on possible relationship with a particular
phenotype.
Keywords: Ploceidae, ND3 gene, mitochondrial DNA
22
16
Species diversity of Amorphophallus (Araceae) in Bali and Lombok with
species attention to genetic study in A. paeoniifolius (Dennst.) Nicolson
Agung Kurniawan*, I Putu Agus Hendra Wibawa & Bayu Adjie
Bali Botanic Garden, Indonesian Institute of Science (LIPI), Candikuning, Baturiti, Tabanan, Bali –
82191, Tel.: Phone +62 368 21273, Fax.:. +62 368 22051, *Email: agung_kurnia1@yahoo.com
ABSTRACT
Amorphophallus belongs to Araceae family that consist of more than 170 species worldwide and
distributed predominantly in tropical countries, especially in Asia and Africa. The study of
Amorphophallus in Bali and Lombok Islands had been conducted to revealed its diversity. Genetic
study was also investigated among Amorphophallus paeoniifolius species to recognize the variation
within the species. The fieldworks showed 3 (three) species Amorphophallus distributed in Bali,
notably A.muelleri Blume, A.paeoniifolius (Dennst.) Nicolson, A.variabilis Blume and 2 (two) species
in Lombok, notably A.muelleri and A.paeoniifolius. var. hortensis and var. sylvestris were two
varieties of A.paeoniifolius that commonly found either in Bali or in Lombok. Genetic study on
A.paeoniifolius indicated that there was no genetic variation in cpDNA region of trnL‐F IGS within the
species.
Keywords: Amorphophallus paeoniifolius, diversity, genetic variation, cpDNA
23
17
Anatomy and morphology character of five Indonesian banana cultivars
(Musa spp.) based on their ploidy level
ISSIREP SUMARDI , MERA WULANDARI
*
Faculty of Biology, Gadjah Mada University (UGM), Jl. Teknika Selatan, Sekip Utara, Yogyakarta 55281,
Indonesia Tel. & Fax: +62‐0274‐580839, *Email: issirepsumardi@yahoo.co.id
ABSTRACT
In Indonesia there are many cultivars of banana, and some of them produce edible fruits.Beside their
morphology, the character which necessary as a tool for classification is anatomical character. The
aimed of this research were to describe the anatomical character and morphology of fives
Indonesian banana cultivars based on their level of ploidy. The cultivars were collected from Banana
Germplasm Plantation, Yogyakarta District, Indonesia. The samples of roots, rhizome, and leaf were
collected from five banana cultivars i.e.: Musa acuminata cv Penjalin, M.balbisiana cv Kluthuk
Warangan , M.acuminata cv Ambon Warangan, M.paradisiaca cv Raja Nangka , and M. paradisiaca
cv Kluthuk Susu. For anatomy observation samples were prepared using paraffin method, stained
with 1% safranin in 70% ethanol. To know the structure of stomata and epidermis surface slide were
prepared using modification of whole mount method. Slides were observed using Olympus BHB
microscope completed with Olympus camera BM‐10A. The result revealed that the structure of
banana root of five cultivars showed anomalous structure. Big airspace scaterred in the cortex area,
except for Raja Nangka cultivar. The rhizome consist of periphery and central zone. The partition of
both zones was the existence of small vascular bundle that form regular circle. Mesophyll compossed
of pallisade and spongy parenchyma. Some of spongy parenchyma cells breakdown to form large
airspace. Stomata distributed in the upper and lower leaf epidermis, and in the innerside and
outerside of pseudostem. The size of triploid stomata on the upper and lower epidermis layer of
leaves longer than the diploid one. Morphologically the shape and the size of the petiole is quite
different, but the anatomy did not show any differences. Many airspace were found in petiole.
Key word: anatomical character, morphology, banana cultivar, ploidy level
24
18
Study on epiphytic orchid diversity and its host tree at Gunung Manyutan
Forest Reserve, Wilis Mountain, Ponorogo, East Java
Nina Dwi Yulia*, Sugeng Budiharta
Purwodadi Botanic Garden‐Indonesian Institute of Sciences
Jl. Raya Surabaya‐Malang Km. 65, Purwodadi, Pasuruan 67163, East Java, Indonesia.
Tel.: +62 341 426046; Fax.: +62 341 426046Jl; *E‐mail: ndyulia@yahoo.com
ABSTRACT
Natural forests in Wilis Mountain have been destructed by forest fires, landslides and illegal logging.
As a consequence, biological diversity in this area is threatened to local extinction, particularly for
orchid species. This study is aimed to explore, document and analyze the diversity of epiphytic orchid
at Gunung Manyutan Forest Reserve, a natural forest area in Wilis Mountain. Quadrat method of 25
x 25 m2 of sample plot was used. All data on orchid species were recorded including its number, host
trees and zone at the host tree where the orchid attached. The results showed that of eight sample
plots, there were 29 epiphytic orchid species recorded. Flickingeria angulata was the most abundant
species (RA = 38.74), continued by Appendicula sp. (RA = 10.91) and Eria hyacinthoides (RA = 6.57).
Three most important host trees were Pinus merkusii, Schima wallichii and Engelhardia spicata. Zone
three (bottom part of the branches) was revealed as the most favorable part at the host tree (281
individuals), while zone one (bottom part of the main stem) was the least preferable one.
Keywords: diversity, epiphytic orchid, Flickingeria angulata, host tree, Wilis Mountain.
Running title: Orchid diversity and its host tree in Wilis Mountain.
25
19
Inventory of orchids species in Lamedai Nature Reserve, Kolaka, Southeast
Sulawesi
DEWI AYU LESTARI, WIDJI SANTOSO
Purwodadi Botanical Garden, Indonesian Institute of Science (LIPI), Pasuruan 67163
Jl. Raya Surabaya – Malang KM. 65 Purwodadi, Pasuruan – East Java
Tel/Fax : (0343) 615033
Email : chunyang_dee@yahoo.co.id
ABSTRACT
Orchid is one of the ornamental plants which have been high commercial value. Therefore, orchid
often has been over exploitation. Finally, some of orchid species are becoming threatened or even
endangered. Purwodadi Botanical Garden as an institute of ex‐situ conservation play role with it. The
aim of this research is to inventory orchid’s species in Lamedai Nature Reserve, Kolaka, Southeast
Sulawesi by explorative method. The result showed that there were 27 orchids species, consist of , 25
species (16 genera ) epiphytic orchid and 2 species terrestrial orchid such as Eulophia keitii var.
celebica and Goodyera rubicunda (Blume) Lindl. The host preference for the epiphytic orchid are the
group of Myrtaceae family like Syzygium sp., Metrosideros vera Niederen and Metrosideros sp. They
mostly grow on the main stem of the tree zone 1 on thick substrate (moss) and get a little abundance
of sunlight (calm).
Keywords : orchid, inventory, explorative, Lamedai Nature Reserve
26
DAFTAR PESERTA, PEMAKALAH*, PANITIA**
1. Agung Kurniawan, S.Si.* Bali Botanic Garden, Indonesian Institute of Science (LIPI),
Candikuning, Baturiti, Tabanan, Bali – 82191, Tel.: Phone
+62 368 21273, Fax.: +62 368 22051, *Email:
agung_kurnia1@yahoo.com
2. Agus Sudibyo Jati* Department Forest Resource Conservation, Faculty of
Forestry, Gadjah Mada University. Jl. Agro, No. 1,
bulaksumur, Yogyakarta. 55281. tel. 0274‐512102, fax.
0274‐550541. email: wishben@yahoo.com
3. Ahmad Dwi Setyawan, M.Si.** Department of Biology, Faculty of Mathematics and Natural
Sciences, Sebelas Maret University, Surakarta, Jl. Ir. Sutami
36A Surakarta 57126. Tel. +62‐271‐7994097, Tel. & Fax.:
+62‐271‐663375, Email: unsjournals@gmail.com
4. Alfonds Andrew Maramis, S.Si., Biology Department, Faculty of Mathematics and Natural
M.Si. * Science, State University of Manado (UNIMA), Kampus
UNIMA at Tondano, Minahasa, 95618, North of Sulawesi,
Tel.: +62‐431‐321945, 321846, 321847, Fax.: +62‐431‐
321866, email: alfondsm@yahoo.com
5. Ari Pitoyo, S.Si.** Department of Biology, Faculty of Mathematics and Natural
Sciences, Sebelas Maret University, Surakarta, Jl. Ir. Sutami
36A Surakarta 57126. Tel. +62‐271‐7994097, Tel. & Fax.:
+62‐271‐663375, Email: aripitoyo@yahoo.co.id
6. Charis Amarantini* Faculty of Biology, Duta Wacana Christian University. Jl. Dr.
Wahidin Sudirohusodo No. 5‐27, Yogjakarta 55224,
Telepon : (0274) 563929, Fax : (0274) 4513235, email:
charis@ukdw.ac.id
7. Deden Mudiana, S.Hut* Purwodadi Botanical Garden, Indonesian Institute of
Sciences (LIPI), Jl. Raya Surabaya‐Malang, Km 65,
Purwodadi, Pasuruan 67163, East Java, Indonesia, Tel./Fax.:
(0341) 426046, Email: *dmudiana@yahoo.com,
8. Dewi Ayu Lestari, S.P. * Purwodadi Botanical Garden, Indonesian Institute of
Science (LIPI), Pasuruan 67163
Jl. Raya Surabaya – Malang KM. 65 Purwodadi, Pasuruan –
East Java, Tel/Fax : (0343) 615033
Email : chunyang_dee@yahoo.co.id
9. Dr. Artini Pangastuti, M.Si.** Department of Biology, Faculty of Mathematics and Natural
Sciences, Sebelas Maret University, Surakarta, Jl. Ir. Sutami
36A Surakarta 57126. Tel. +62‐271‐7994097, Tel. & Fax.:
+62‐271‐663375, Email: artini_pangastuti@yahoo.com
27
10. Dr. Agung Budiharjo, M.Si.** Department of Biology, Faculty of Mathematics and Natural
Sciences, Sebelas Maret University, Surakarta, Jl. Ir. Sutami
36A Surakarta 57126. Tel. +62‐271‐7994097, Tel. & Fax.:
+62‐271‐663375, Email: artini_pangastuti@yahoo.com
11. Dr. Drh. R. Susanti, M.P. * Department of Biology, Faculty of Mathematics and Natural
Sciences, Semarang State University, Jl. Sekar Gading Barat
No. 8, Kalisegoro, Gunungpati, Semarang 50229, Central
Java, Indonesia. Tel & Fax. ‐ email: rsant_ti@yahoo.com
12. Dr. Ir. Lily Surayya Eka Putri, Department of Biology Faculty of Science and Technology,
M.Env.Stud. * State Islamic University (UIN) Syarif Hidayatullah Jakarta, Jl.
Ir. H. Djuanda no.95 Ciputat 15412, Tel: +62‐21‐7493606,
Fax: +62‐21‐7493315, Email: lsurayya@yahoo.com
13. Dr. Ir. Sri Wilujeng, M.Si. * Biology Program, Mathematics and Basic Science Education
Department, Education Faculty, Cendrawasih University
Jalan Raya Sentani – Abepura 99667 Papua Indonesia
Telp. (0967) 582806; 587713 Email:
sriwilujeng@yahoo.co.id
14. Dr. Sugiyarto, M.Si.** Department of Biology, Faculty of Mathematics and Natural
Sciences, Sebelas Maret University, Surakarta, Jl. Ir. Sutami
36A Surakarta 57126. Tel. +62‐271‐7994097, Tel. & Fax.:
+62‐271‐663375, Email: sugiyarto_ys@yahoo.com
15. Dr. Sunarto, M.S.** Department of Biology, Faculty of Mathematics and Natural
Sciences, Sebelas Maret University, Surakarta, Jl. Ir. Sutami
36A Surakarta 57126. Tel. +62‐271‐7994097, Tel. & Fax.:
+62‐271‐663375, Email: ‐
16. Dra. Endang Anggarwulan, Department of Biology, Faculty of Mathematics and Natural
M.Si.** Sciences, Sebelas Maret University, Surakarta, Jl. Ir. Sutami
36A Surakarta 57126. Tel. +62‐271‐7994097, Tel. & Fax.:
+62‐271‐663375, Email: e_anggarwulan@yahoo.co.id
17. Dra. Marti Harini, M.Si.** Department of Biology, Faculty of Mathematics and Natural
Sciences, Sebelas Maret University, Surakarta, Jl. Ir. Sutami
36A Surakarta 57126. Tel. +62‐271‐7994097, Tel. & Fax.:
+62‐271‐663375, Email: ‐
18. Dra. Noor Soesanti Handajani, Department of Biology, Faculty of Mathematics and Natural
M.Si.** Sciences, Sebelas Maret University, Surakarta, Jl. Ir. Sutami
36A Surakarta 57126. Tel. +62‐271‐7994097, Tel. & Fax.:
+62‐271‐663375, Email: ‐
28
19. Dra. Serafinah Indriyani, M.Si. * 1 Post‐graduate program, Program Study of Mathematics
and Natural Sciences, Airlangga University, Surabaya 60115,
East Java, Indonesia
² Biology Department, Faculty of Mathematics and Natural
Sciences, Brawijaya University, Jl. Veteran, Malang 65145,
East Java, Indonesia. Tel. & Fax.: +62‐341‐575841. E‐mail:
s.indriyani@ub.ac.id
20. Elisa Herawati, M.Sc.** Department of Biology, Faculty of Mathematics and Natural
Sciences, Sebelas Maret University, Surakarta, Jl. Ir. Sutami
36A Surakarta 57126. Tel. +62‐271‐7994097, Tel. & Fax.:
+62‐271‐663375, Email: ‐
21. Esti Endah Ariyanti, S.Si., M.Sc. Purwodadi Botanical Garden, Indonesian Institute of
Sciences (LIPI), Jl. Raya Surabaya‐Malang, Km 65,
Purwodadi, Pasuruan 67163, East Java, Indonesia, Tel./Fax.:
(0341) 426046, Email: **estimudiana@yahoo.com
1
22. Ir. Dwi Hastuti, M.P. * The Stabilization Office of Forest Area XI, Ministry of
Forestry, Jl. Ngeksigondo Street 58 Kotagede, Yogyakarta
55178, Indonesia, Tel./Fax.:+62‐274‐451880, Email:
tutidwi@hotmail.com
23. Ir. Kristamtini, M.Si. * Balai Pengkajian Teknologi Pertanian (BPTP) Yogyakarta, Jl.
Rajawali No 28 Demangan Baru Yogyakarta, Telp. (0274)
884662 Fax. (0274) 447705, email: ‐
24. Ir.Titut Yulistyarini, M.P. * Purwodadi Botanic Garden, Indonesian Institute of
Sciences, Jl. Raya Surabaya‐Malang Km. 65, Purwodadi,
Pasuruan 67163, East Java, Indonesia, Tel.: +62 341
426046; Fax.: +62 341 426046Jl; *e‐mail:
tyulistyarini@yahoo.com
25. M. Indrawan, M.Si.** Department of Biology, Faculty of Mathematics and Natural
Sciences, Sebelas Maret University, Surakarta, Jl. Ir. Sutami
36A Surakarta 57126. Tel. +62‐271‐7994097, Tel. & Fax.:
+62‐271‐663375, Email: ‐
26. Mera Wulandari, S.Si. * Faculty of Biology, Gadjah Mada University (UGM), Jl.
Teknika Selatan, Sekip Utara, Yogyakarta 55281, Indonesia
Tel. & Fax: +62‐0274‐580839, *Email:
merawulandari@yahoo.com
27. Nina Dwi Yulia, S.Si., M.Si. * Purwodadi Botanic Garden‐Indonesian Institute of Sciences
Jl. Raya Surabaya‐Malang Km. 65, Purwodadi, Pasuruan
67163, East Java, Indonesia.
Tel.: +62 341 426046; Fax.: +62 341 426046Jl; *E‐mail:
ndyulia@yahoo.com
29
28. Prof. Drs. Suranto, M.Sc., Department of Biology, Faculty of Mathematics and Natural
Ph.D.** Sciences, Sebelas Maret University, Surakarta, Jl. Ir. Sutami
36A Surakarta 57126. Tel. +62‐271‐7994097, Tel. & Fax.:
+62‐271‐663375, Email: nnsutarno@yahoo.com
29. Prof. Drs. Sutarno, M.Sc., Department of Biology, Faculty of Mathematics and Natural
Ph.D.** Sciences, Sebelas Maret University, Surakarta, Jl. Ir. Sutami
36A Surakarta 57126. Tel. +62‐271‐7994097, Tel. & Fax.:
+62‐271‐663375, Email: nnsutarno@yahoo.com
30. Purin Candra Purnama, M.Si.** Department of Biology, Faculty of Mathematics and Natural
Sciences, Sebelas Maret University, Surakarta, Jl. Ir. Sutami
36A Surakarta 57126. Tel. +62‐271‐7994097, Tel. & Fax.:
+62‐271‐663375, Email: ‐
31. Rita Rakhmawati, M.Si., Apt** Department of Biology, Faculty of Mathematics and Natural
Sciences, Sebelas Maret University, Surakarta, Jl. Ir. Sutami
36A Surakarta 57126. Tel. +62‐271‐7994097, Tel. & Fax.:
+62‐271‐663375, Email: oktia@yahoo.com
32. Rofiq Sunaryanto* Center of Biotechnology BPPT, PUSPIPTEK, Serpong,
Tangerang Selatan, Banten 15340 Indonesia Telp/Fax.+62
21 7560208, email: rofiqsn@yahoo.com
33. Siti Sofiah, S.P. * Purwodadi Botanical Garden, Indonesian Institute of
Sciences (LIPI), Jl. Raya Surabaya‐Malang Km. 65,
Purwodadi‐Pasuruan 67163, East Java, Indonesia, Tel./ Fax.:
+62‐341‐426046, +62‐341‐615033, Email:
sofie2291@yahoo.com
34. Solichatun, M.Si.** Department of Biology, Faculty of Mathematics and Natural
Sciences, Sebelas Maret University, Surakarta, Jl. Ir. Sutami
36A Surakarta 57126. Tel. +62‐271‐7994097, Tel. & Fax.:
+62‐271‐663375, Email: solichatun_s@yahoo.com
35. Suratman, M.Si.** Department of Biology, Faculty of Mathematics and Natural
Sciences, Sebelas Maret University, Surakarta, Jl. Ir. Sutami
36A Surakarta 57126. Tel. +62‐271‐7994097, Tel. & Fax.:
+62‐271‐663375, Email: suratmanmipauns@yahoo.com
36. Teguh Pribadi, S.Hut., M.Si. Fakultas Pertanian, Universitas PGRI Palangkaraya, Jl. Hiu
Putih‐Tjilik Riwut Km 7, Palangkaraya 73112, Kalimantan
Tengah, Tel.: +62‐532‐3220778, email:
tgpribadi@gmail.com
37. Tjahjadi Purwoko, M.Si.** Department of Biology, Faculty of Mathematics and Natural
Sciences, Sebelas Maret University, Surakarta, Jl. Ir. Sutami
36A Surakarta 57126. Tel. +62‐271‐7994097, Tel. & Fax.:
+62‐271‐663375, Email: ‐
30
38. Tri Yahya Budiarso Faculty of Biology, Duta Wacana Christian University. Jl. Dr.
Wahidin Sudirohusodo No. 5‐27, Yogjakarta 55224,
Telepon : (0274) 563929, Fax : (0274) 4513235, email:
yahya@ukdw.ac.id
39. Utaminingsih, S.Si. Faculty of Biology, Gadjah Mada University (UGM), Jl.
Teknika Selatan, Sekip Utara, Yogyakarta 55281, Indonesia
Tel. & Fax: +62‐0274‐580839, *Email:
utaminingsih87@yahoo.com
40. Widya Mudyantini, M.Si.** Department of Biology, Faculty of Mathematics and Natural
Sciences, Sebelas Maret University, Surakarta, Jl. Ir. Sutami
36A Surakarta 57126. Tel. +62‐271‐7994097, Tel. & Fax.:
+62‐271‐663375, Email: widyamudyantini@yahoo.com
41. Yaya Ihya Ulumuddin* Research Center for Oceanography, Indonesian Institute of
Sciences (PPO, LIPI), Jl. Pasir Putih I No.1 Ancol Timur,
Jakarta Utara 14430, Indonesia, Tel. +62‐21‐64713850, Fax.
+62‐21‐64711948, Email: yaya_lipi@yahoo.com
42. Yohanes Yoseph Rahawarin, Faculty of Forestry, the State University of Papua (UNIPA),
S.Hut, M.Sc. * Jl. Gunung Salju, Amban‐Manokwari 98314, West Papua,
Indonesia, Tel & Fax.: +62‐986‐211364, Email:
yohanesrahawarin@yahoo.com
31
DAFTAR ANGGOTA MBI
No. Tanggal Tanggal Nama Foto Gelar Gelar Jenjang Institusi Alamat Barcode Kete‐
ang mendaftar disetujui depan belakang pendidikan rangan
gota
001 20060717 20060717 Sutarno Prof. Drs. M.Sc., Ph.D. 4 Universitas Surakarta, Jawa Tengah Pendiri;
Sebelas Maret nnsutarno@yahoo.com Editor‐in‐
chief
32
006 20060717 20060717 Arrijani Dr. M.Si. 3 Universitas Tondano, Sulawesi Utara Pendiri
Negeri Manado arjan_abdullah@yahoo.co.uk
33
012 20100320 20100722 Campbell O Dr. 3 Arnold New York, U.S.A. Anggota
Webb Arboretum of cwebb@oeb.harvard.edu
Harvard
University
34
019 20100323 20100722 Yuyu Dr. 3 Pusat Bogor, Jawa Barat Anggota
Suryasari Penelitian yyspoerba@yahoo.com
Poerba Biologi, LIPI
35
025 20100324 20100722 Moh. Basri Dr. Ir. M.P. 3 Fakultas Palu, Sulawesi Tengah Anggota
Pertanian, muhamadbasri@yahoo.com
Universitas
Tadulako
36
031 20100326 20100722 Luchman S.Si., 3 Jurusan Malang, Jawa Timur Anggota
Hakim M.AgrSc., Biologi, FMIPA, lufehakim@yahoo.com
Ph.D. Universitas
Brawijaya
37
037 20100330 20100722 Esti Endah S.Si., M.Sc. 2 UPT BKT Kebun Pasuruan, Jawa Timur Anggota
Ariyanti Raya estimudiana@yahoo.com
Purwodadi, LIPI
38
043 20100401 20100722 Deden S.Hut 2 Kebun Raya Pasuruan, Jawa Timur Anggota
Mudiana Purwodadi dmudiana@yahoo.com
39
049 20100413 20100722 Hermanus S.Hut 1 Fakultas Manokwari, Papua Barat Anggota
Warmetan Kehutanan, hermanus_warmetan@yahoo.co.id
Universitas
Negeri Papua
40
056 20100418 20100722 Sri M,Si., Apt 2 Fakultas Yogyakarta Anggota
Mulyaningsih Farmasi, nining_mae@yahoo.com
Universitas
Islam
Indonesia
057 20100419 20100722 Petrus Izak S.Hut 1 Fakultas Manokwari, Papua Barat Anggota
Bumbut Kehutanan, petrus_bumbut@yahoo.com
Universitas
Negeri Papua
41
063 20100601 20100722 Novri Nelly Dr. Ir. MP. 3 Fakultas Padang, Sumatera Barat Anggota
Pertanian, novrinelly@yahoo.com
Universitas
Andalas
42
070 20100606 20100722 Syamsul A Dr. Ir. M.Sc. 3 Universitas Yogyakarta Anggota
Siradz Gadjah Mada ssiradz@yahoo.co.uk
43
077 20100603 20100722 Sri Pujiyanto S.Si., M.Si. 2 Universitas Semarang, Jawa Tengah Anggota
Diponegoro spujiyanto@hotmail.com
44
084 20100621 20100722 Eddy Dr. M.Sc. 3 Universitas Sungailiat, Bangka Belitung Anggota
Nurtjahya Bangka eddy_nurtjahya@yahoo.com
Belitung
45
091 20100705 20100722 Dwi Hastuti Ir. M.P. 2 BPKH Wilayah Yogyakarta Anggota
XI, tutidwi@hotmail.com
Kementerian
Kehutanan
46
098 20100707 20100722 Betty Mauliya M.Sc. 2 FMIPA, Banda Aceh, NAD Anggota
Bustam Universitas liya1304@yahoo.com
Syiah Kuala
Catatan:
Data dan foto anggota tidak diperkenankan untuk digunakan selain bagi kepentingan MBI, kecuali dengan ijin pemilik.
Formulir Aplikasi Keanggotaan MBI dan AD/ART MBI dapat diunduh di www.scribd.com/unsjournals
47
Journal of Biological Diversity
V o l u m e 1 1 – N u m b e r 3 – J u l y 2 0 1 0
FIRST PUBLISHED:
2000
ISSN:
1412-033X (printed edition)
2085-4722 (electronic)
EDITOR-IN-CHIEF:
Sutarno
EDITORIAL MEMBERS:
English Literary Editor: I Made Sudiana (sudianai@yahoo.com)
Technical Editor & Banking: Solichatun (solichatun_s@yahoo.com)
Distribution & Marketing: Rita Rakhmawati (oktia@yahoo.com)
Webmaster: Ari Pitoyo (aripitoyo@yahoo.com)
MANAGING EDITORS:
Ahmad Dwi Setyawan (unsjournals@gmail.com)
PUBLISHER:
Department of Biology, Faculty of Mathematics and Natural Sciences, Sebelas Maret University, Surakarta and
The Society for Indonesian Biodiversity
ADDRESS:
Jl. Ir. Sutami 36A Surakarta 57126. Tel. +62-271-7994097, Tel. & Fax.: +62-271-663375, Email: unsjournals@yahoo.com
BANKING:
Solichatun, BNI KC Sebelas Maret, Acc. No. 0033691646
ONLINE:
www.unsjournals.com
BIODIVERSITAS, the Journal of Biological Diversity publishes and pictures are preferably presented in a digital file. JPEG format should be
scientific articles, i.e. original research and review in all biodiversity aspects sent in the final (accepted) article. Author could consign any picture or photo
of plants, animals and microbes at the level of gene, species, and ecosystem. for front cover, although it does not print in the manuscript. There is no
Scientific feedback (short communication) is only received for manuscript, appendix, all data or data analysis are incorporated into Results and
which criticize published article before. Manuscripts will be reviewed by Discussions. For broad data, it can be displayed in website as Supplement.
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only articles written in English (U.S. English) are accepted for publication. arranged from oldest to newest and from A to Z. The sentence sourced from
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order to support reduction of global warming as a consequence of article written by two authors, both of them should be mentioned, however,
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be attached. Carranza S, Arnold EN (2006) Systematics, biogeography and evolution of
Manuscript is typed at one side of white paper of A4 (210x297 mm2) Hemidactylus geckos (Reptilia: Gekkonidae) elucidated using mitochondrial
size, in a single column, double space, 12-point Times New Roman font, DNA sequences. Mol Phylogenet Evol 38: 531-545.
with 2 cm distance step aside in all side. Smaller letter size and space can be Saharjo BH, Nurhayati AD (2006) Domination and composition structure
applied in presenting table. Word processing program or additional software change at hemic peat natural regeneration following burning; a case
can be used, however, it must be PC compatible and Microsoft Word based. study in Pelalawan, Riau Province. Biodiversitas 7: 154-158.
Names of sub-species until phylum should be written in italic, except for Book:
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especially for taxonomic manuscripts. Name of genera can be shortened after
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biogeography, and the phylogenetic structure of rainforest tree
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communities. In: Carson W, Schnitzer S (eds) Tropical forest
should be avoided, otherwise generating confusion. Mentioning of scientific
community ecology. Wiley-Blackwell, New York.
name completely can be repeated at Materials and Methods. Biochemical
and chemical nomenclature should follow the order of IUPAC-IUB, while Abstract:
its translation to Indonesian-English refers to Glossarium Istilah Asing- Assaeed AM (2007) Seed production and dispersal of Rhazya stricta. 50th
Indonesia (2006). For DNA sequence, it is better used Courier New font. annual symposium of the International Association for Vegetation
Symbols of standard chemical and abbreviation of chemistry name can Science, Swansea, UK, 23-27 July 2007.
be applied for common and clear used, for example, completely written Proceeding:
butilic hydroxytoluene to be BHT hereinafter. Metric measurement use IS Alikodra HS (2000) Biodiversity for development of local autonomous
denomination, usage other system should follow the value of equivalent with government. In: Setyawan AD, Sutarno (eds) Toward mount Lawu
the denomination of IS first mentioning. Abbreviation set of, like g, mg, mL, national park; proceeding of national seminary and workshop on
etc. do not follow by dot. Minus index (m-2, L-1, h-1) suggested to be used, biodiversity conservation to protect and save germplasm in Java island.
except in things like “per-plant” or “per-plot”. Equation of mathematics Sebelas Maret University, Surakarta, 17-20 July 2000. [Indonesian]
does not always can be written down in one column with text, for that case Thesis, Dissertation:
can be written separately. Number one to ten are expressed with words, Sugiyarto (2004) Soil macro-invertebrates diversity and inter-cropping plants
except if it relates to measurement, while values above them written in productivity in agroforestry system based on sengon. [Dissertation].
number, except in early sentence. Fraction should be expressed in decimal. Brawijaya University, Malang. [Indonesian]
In text, it should be used “%” rather than “gratuity”. Avoid expressing idea Information from internet:
with complicated sentence and verbiage, and used efficient and effective Balagadde FK, Song H, Ozaki J, Collins CH, Barnet M, Arnold FH, Quake
sentence. Manuscript of original research should be written in no more than SR, You L (2008) A synthetic Escherichia coli predator-prey ecosystem.
25 pages (including tables and picture), each page contain 700-800 word, or Mol Syst Biol 4: 187. www.molecularsystemsbiology.com
proportional with article in this publication number. Invited review articles
will be accommodated. Publication manuscript “in press” can be cited and mentioned in
Title of article should be written in compact, clear, and informative reference (bibliography); “personal communications” can be cited, but
sentence preferably not more than 20 words. Name of author(s) should be cannot be mentioned in reference. Research which not be published or
completely written. Running title is about five words. Name and “submitted” cannot be cited.
institution address should be also completely written with street name and Some annotation. Manuscript typed without sign link (-) (except
number (location), zip code, telephone number, facsimile number, and e-mail repeated word in Indonesian). Usage of letter “l” (el) to “1” (one) or “O”
address. Manuscript written by a group, author for correspondence along (oh) to “0” (null) should be avoided. Symbols of α, β, χ, etc. included
with address is required. First page of the manuscript is used for writing through facility of insert, non altering letter type. No space between words
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Abstract should not be more than 200 words, written in English. Progress of manuscript. Notification of manuscript whether it is
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however, for manuscript with long discussion should be divided into sub manuscript will get one original copy of journal containing manuscript
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express the mentioned results in the form of sentences. Concluding sentence
should preferably be given at the end of the discussion. Acknowledgments NOTE: Author(s) agree to transfer copy right of published paper to
are expressed in a brief. BIODIVERSITAS, Journal of Biological Diversity. Authors shall no longer
Figures and Tables of maximum of three pages should be clearly be allowed to publish manuscript completely without publisher permission.
presented. Title of a picture is written down below the picture, while title of a Authors or others allowed multiplying article in this journal as long as not
table is written in the above the table. Colored picture and photo can be for commercial purposes. For the new invention, authors suggested to
accepted if information in manuscript can lose without those images. Photos manage its patent before publishing in this journal.