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Ch. 5 - 2
An object is achiral (not chiral) if the object and its mirror image are identical
Ch. 5 - 3
Ch. 5 - 4
Chiral molecules are molecules that cannot be superimposable with their mirror images
O N O
O Thalidomide
One enantiomer causes birth defects, NH O the other cures morning sickness
Ch. 5 - 5
Ch. 5 - 6
66% of all drugs in development are chiral, chiral 51% are being studied as a single enantiomer Of the $475 billion in world-wide sales of formulated pharmaceutical products in 2008, $205 billion was attributable to single enantiomer drugs
Ch. 5 - 7
Isomers: different compounds that p have the same molecular formula Constitutional isomers: isomers that have the same molecular formula but different connectivity their atoms are connected in a different order
Ch. 5 - 8
C3H7Cl
Cl 1-Chloropropane
and 2-Chloropropane
Ch. 5 - 9
C4H8O2
Ch. 5 - 10
2B. Stereoisomers
Stereoisomers are NOT constitutional isomers Stereoisomers have their atoms connected in the same sequence but q they differ in the arrangement of their atoms in space. The consideration of such spatial aspects of molecular structure is called stereochemistry
Ch. 5 - 11
Stereoisomers can be subdivided into two general categories: enantiomers & diasteromers Enantiomers stereoisomers whose molecules are nonsuperposable mirror images of each other Diastereomers stereoisomers whose molecules are not mirror images of each other Ch. 5 - 12
(cis)
Cl H Cl and H H
(trans)
Cl H Cl
(cis)
(trans)
Ch. 5 - 13
Subdivision of Isomers
(different compounds with same molecular formula)
Isomers
Constitutional Isomers
(isomers whose atoms have a different connectivity) diff t ti it )
(isomers that have the same connectivity but differ in spatial arrangement of their atoms)
Stereoisomers
Enantiomers
Diastereomers
Ch. 5 - 14
Ch. 5 - 15
OH
(2-Butanol)
H () (I)
OH
HO
H ( ) (II)
Ch. 5 - 16
The most common type of chiral compounds that we encounter are molecules that contain a carbon atom l l th t t i b t bonded to four different groups. Such a carbon atom is called an asymmetric carbon or a chiral center and is usually designated with an asterisk (*)
Ch. 5 - 17
Cl Me C* Et H
H
Cl
Cl Et
H Me (IV)
Me Et (III)
mirror i
Ch. 5 - 18
Cl Me C Me H
H Me (V)
Cl Me
Cl Me mirror i
Me (VI)
Ch. 5 - 19
HO
Me * Et (A)
Et * Me (B) mirror
H Ph (D) mirror
Ph H
Ch. 5 - 22
Ch. 5 - 23
Thalidomide
The activity of drugs containing chirality centers can vary b t hi lit t between enantiomers, sometimes with serious or even tragic consequences For several years before 1963 thalidomide was used to alleviate the symptoms of morning sickness in pregnant women t
Ch. 5 - 24
In 1963 it was discovered that thalidomide (sold as a mixture of both enantiomers) was the cause of horrible birth defects in many children born subsequent to the use of the drug
O O O N O NH O O N NH O
Plane of symmetry
Me
Cl Me H
achiral hi l
Cl Me H Et
No plane of symmetry
chiral
Ch. 5 - 27
7.
Recall:
Using only the IUPAC naming that we have learned so f these two enantiomers will l d far, h ll have the same name: 2-Butanol This is undesirable because each compound must have its own distinct name
Ch. 5 - 28
Rule 1 Assign priorities to the four different groups on the stereocenter from highest to lowest (priority bases on atomic number, the higher the atomic number, the higher the , g priority)
Ch. 5 - 29
Rule 2 When a priority cannot be assigned on the basis of the atomic number of the atoms that are directly attached to the chirality center, then h d h hi li h the next set of atoms in the unassigned groups is examined. This process is continued until a decision can be made.
Ch. 5 - 30
Rule 3 Visualize the molecule so that the lowest priority group is directed away from you, then trace a path from hi h f highest to lowest priority. If l i i f the path is a clockwise motion, then the configuration at the asymmetric carbon is (R). If the path is a counter-clockwise motion, then the configuration is (S)
Ch. 5 - 31
Example
HO
(2-Butanol)
Step 1:
or
or
Step 2:
H3C
(H, H, H)
C CH 3 C H2
(C, H, H)
Ch. 5 - 32
OH Et
H
OH
Me M
Et Me OH
HO H Et = H
OH Me Et
Me
Et Me
(R) 2 )-2-Butanol l
Ch. 5 - 33
Other examples
Cl
Cl
Counterclockwise
H HO
CH3
HO O
C CH3
(S)
Clockwise
OCH3
CH2CH3
OCH3 Br
H3 C
Br
(R)
Ch. 5 - 34
CH2CH3
Other examples
Rotate CCl bond such that H is pointed to the back
Cl Br HO
Cl
Br
OH
Cl
Clockwise
Br
OH
(R)
Ch. 5 - 35
Other examples
Rotate CCH3 bond such that H is p pointed to the back
H I H3C
OCH3
OCH3
H I H3C
OCH3 I
H3C
(S)
Ch. 5 - 36
Rule 4 F groups containing double or For t i i d bl triple bonds, assign priorities as if both atoms were duplicated or triplicated p
e.g.
C O as C O O C C C C C C C C C C C
C C
as
C C
as
Ch. 5 - 37
Example
CH3
H HO
(S)
CH=CH CH CH2
Compare C
CH3
&
CH CH2 : H H C C H C C
equivalent to
(H, H, H)
CH CH2 (C, C, H)
Ch. 5 - 38
Other examples
OH
(R)
CH3
Cl O
H2C
OH
CH3 C (O, O, C)
H
Cl
(S)
C (O, H, H)
Ch. 5 - 39
8.
H
*
CH3 mirror
H3C
Cl CH2CH3
Ch. 5 - 40
Enantiomers have identical physical properties (e.g. melting point, boiling ti ( lti i t b ili point, refractive index, solubility etc.)
Compound bp (oC) 99.5 99.5 168 170 168 170 210 212
Ch. 5 - 41
mp (oC)
Enantiomers Have the same chemical properties (except reaction/interactions with chiral substances) Sh Show different b h i only when diff behavior l h they interact with other chiral substances Turn plane polarized light on plane-polarized opposite direction
Ch. 5 - 42
Optical activity The property possessed by chiral substances of rotating the plane of polarization of plane-polarized light
Ch. 5 - 43
The electric field (like the magnetic field) of light is osc at g in a e d) o g t s oscillating all possible planes When this light passes through a polarizer (Polaroid lens), we get planepolarized light (oscillating in only one l i d li ht ( ill ti i l plane)
Polaroid lens l
Ch. 5 - 44
Ch. 5 - 45
[ ] []D =
wavelength g of light ( g (e.g. D-line of Na lamp, =589.6 nm) 589 6 )
The value of depends on the particular experiment (since there are different concentrations with each run) But specific rotation [] should be the same regardless of the concentration t ti
Ch. 5 - 47
Two enantiomers should have the same value of specific rotation, b t th l f ifi t ti but the signs are opposite
CH3 H HO
25
CH3
*
CH2CH3
o
H3CH2C
25
H OH
o
[] = + 13.5
D
mirror
[] = 13.5
D
Ch. 5 - 48
9.
Ch. 5 - 49
Ch. 5 - 50
Two circularlyy polarized beams g counter-rotating at the same velocity ( p (in phase), and ), their vector sum
Two circularly-polarized yp beams counter-rotating , at different velocities, such as after interaction , with a chiral molecule, and their vector sum
Ch. 5 - 51
9A. Racemic Forms A equimolar mixture of two An i l i t ft enantiomers is called a racemic mixture (or racemate or racemic form) A racemic mixture causes no net rotation of plane-polarized light
rotation equal & opposite q pp rotation by the enantiomer
CH3
OH C2H5
H3C
(R)-2-Butanol
A sample of an optically active substance that consists of a single enantiomer i said to be ti is id t b enantiomerically pure or to have an enantiomeric excess of 100%
Ch. 5 - 53
[] [ ]D
25 5
= +13.52
A sample of (S)-(+)-2-butanol that contains less than an equimolar amount of (R) ( ) l h l f )-()-2butanol will show a specific rotation that is less than 13.52 but greater than zero l h b h Such a sample is said to have an enantiomeric excess less than 100%
Ch. 5 - 54
% enantiomeric = excess
Ch. 5 - 55
Example A mixture of th 2 b t i t f the 2-butanol l enantiomers showed a specific rotation of +6.76. The enantiomeric excess of the (S)-(+)( )( ) 2-butanol is 50%
+6.76 +13.52 x 100 = 50%
% enantiomeric = excess *
Ch. 5 - 56
Ch. 5 - 58
10B.
Stereoselective Syntheses
Stereoselective reactions are reactions p that lead to a preferential formation of one stereoisomer over other stereoisomers that p y could possibly be formed enantioselective if a reaction p produces preferentially one enantiomer p y over its mirror image diastereoselective if a reaction leads preferentially to one diastereomer over others that are possible p
Ch. 5 - 59
O OEt F racemate ( )
H , H2O heat h t
O OH + EtOH F racemate ( )
O OEt F racemate ( )
H2O lipase
Ch. 5 - 60
Of the $475 billion in world-wide sales of formulated pharmaceutical products in 2008, $205 billion was attributable to single enantiomer drugs
HO O NMe2 HO NH3 CO2 H
NC
Escitalpram (anti-depressant )
Ch. 5 - 61
CO2H CH3
MeO
NaO2C S Cl N
CH3 HO CH3
Diastereomers Stereoisomers that are not enantiomers Unlike enantiomers, diastereomers usually have substantially different y y chemical and physical properties
Ch. 5 - 63
(I)
Br Cl C H HO C H CH3
Br H C Cl OH H C CH3 Br H C Cl H C CH3 OH
(II)
Br Cl C H (III) CH3 C H HO
(IV)
Note: I compounds with n tetrahedral N In d ih h d l stereocenters, the maximum number of stereoisomers is 2n.
Ch. 5 - 64
(I)
Br Cl C H HO C H CH3
Br H C Cl OH H C CH3 Br H C Cl H C CH3 OH
(II)
Br Cl C H (III) CH3 C H HO
(IV)
(I) & (II) are enantiomers to each other (III) & (IV) are enantiomers to each other
Ch. 5 - 65
(I)
Br Cl C H HO C H CH3
Br H C Cl OH H C CH3 Br H C Cl H C CH3 OH
(II)
Br Cl C H (III) CH3 C H HO
(IV)
Diastereomers to each other: (I) & (III), (I) & (IV), (II) & (III), (III) (IV) (III) (II) & (IV)
Ch. 5 - 66
12A.
Meso Compounds
Compounds with two stereocenters do not always have four stereoisomers (22 = 4) since some molecules are achiral (not chiral), even though they chiral) contain stereocenters F example, 2 3 di hl For l 2,3-dichlorobutane has b t h two stereocenters, but only has 3 stereoisomers (not 4)
Ch. 5 - 67
(I)
CH3 C Br CH3 C Br H H
Br Br
Br Br
Note: (III) contains a plane of symmetry, N i l f is a meso compound, and is achiral ([] = 0o).
Ch. 5 - 68
(I)
CH3 C Br CH3 C Br H H
Br Br
Br Br
(I) & (II) are enantiomers to each other and chiral (III) & (IV) are identical and achiral
Ch. 5 - 69
(I)
CH3 C Br CH3 C Br H H
Br Br
Br Br
(I) & (III), (II) & (III) are diastereomers (III) di Only 3 stereoisomers: y (I) & (II) {enantiomers}, (III) {meso}
Ch. 5 - 70
12B. How to Name Compounds with More than One Chirality Center
Br
1
Br
3 4
a
H
2
C1
C3
(H, H, H) (Br, C, H)
Ch. 5 - 71
Br
2 1 3
Br
C4
3
CH3
C2
CH3
(H, H, H) (Br, C, H)
C3: (R) configuration
F ll name: Full
( , ) , (2R, 3R)-2,3-Dibromobutane
Ch. 5 - 72
Fischer Projection
COOH Ph OH CH3
Ch. 5 - 73
HO
Et
Br
COOH
Ph
Br Et t CH3
Ph O OH
Br B Et
H3C
COOH
H Ph
Me COOH H OH
COOH
H Ph
Me OH
COOH
COOH HO H
Fischer Me Projection P j ti
HO
H H Ph
Me Ph
H
Ch. 5 - 74
H H3C
Cl
Cl CH3
Cl H3C
Cl
H CH3
enantiomers
mirror
Cl H CH3
H Cl
(I) and (II) are both chiral and they are d b th hi l d th enantiomers with each other Ch. 5 - 75
Cl H3C
Plane of symmetry
(III) is achiral (a meso compound) i hi l ( d) (III) and (I) are diastereomers to each ( ) () other
Ch. 5 - 76
achiral
Me H Me H
enantiomers
Plane of symmetry
Ch. 5 - 77
Plane of symmetry
Me
Me
Me
Me Me H Me
H cis-1,4-dimethyl cyclohexane
H trans-1,4-dimethyl cyclohexane
diastereomers
Ch. 5 - 78
1,3-Dimethylcyclohexane
Plane of symmetry
Me
Me
Me H H (meso) Me
cis-1,3-dimethyl
cyclohexane
1,3-Dimethylcyclohexane
NO plane of symmetry
Me * * Me
Me H Me H Me H H Me
trans-1,3-dimethyl
cyclohexane
enantiomers
1,3-Dimethylcyclohexane H t Has two chirality centers b t only hi lit t but l three stereoisomers
cis-1,3-dimethyl
cyclohexane Me H H Me
trans-1,3-dimethyl
cyclohexane Me H H H Me Me H Me
(meso)
enantiomers
Ch. 5 - 81
1,2-Dimethylcyclohexane
mirror
H Me Me H enantiomers H Me Me H
Me M
mirror
Me M H 2 Me
1
H Me
() (I)
( ) (II)
Me Me
2 1
(III)
Ch. 5 - 84
Me H Me
Me H 2 Me
1
(I)
(II)
C1 of (II) and (III) become C2 of (I) & C2 of (II) and (III) become C1 of (I)
Me
Me
(III)
Ch. 5 - 85
2' 1'
Me H Me
Me H 2 Me
1
(I)
(II)
Although (I) and (II) are enantiomers to each other, they can interconvert rapidly i t t idl (I) and (II) are
Me
Me
(III)
achiral
Ch. 5 - 86
15. Relating Configurations through Reactions in Which No Bonds to the Chirality Center Are Broken
If a reaction takes place in a way so that no bonds to the chirality center are broken, the product will of necessity have the same general configuration of groups around the g g p chirality center as the reactant
Ch. 5 - 87
Same configuration
O Me H H NaBH4 MeOH OH H H Me H
Me Ph
H Br
NaCN DMSO
Me Ph
H CN
Same configuration
Ch. 5 - 88
15A. Relative and Absolute Configurations Chi lit centers in different molecules have Chirality t i diff t l l h the same relative configuration if they share three groups in common and if these h th i d th groups with the central carbon can be superposed in a pyramidal arrangement di id l t
Y X A B II C A B I C The chirality centers in I and II have the same relative configuration. Their common groups and central carbon can be superposed. Ch. 5 - 89
The absolute configuration of a chirality center is its (R) or (S) designation, which designation can only be specified by knowledge of the actual arrangement of groups in space at the chirality center
(R)-2-Butanol
(S)-2-Butanol
HO H
enantiomers
H OH
Ch. 5 - 90
e.g. eg
+
R
O R'
OMe CF3 Ph
(1
1)
Kinetic Resolution
OH R * R1 OH R * R1 R2 OH
R *
R1 O R2
R2 (racemic)
One enantiomer reacts fast and fast another enantiomer reacts slow
Ch. 5 - 92
e.g.
t
Me3Si
Me3Si OH + C5H11
Me3Si O OH
OH
C5H11 (racemic)
(-)-DET:
COOEt COOEt
C5H11
HO
42% (99%ee)
43% (99%ee)
Ch. 5 - 93
Ch. 5 - 94
enantiomers
Ch. 5 - 95
mirror H C Cl C C H Cl H Cl H C C C Cl
enantiomers
Ch. 5 - 96
END OF CHAPTER 5
Ch. 5 - 97