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Chapter 1

Introduction

1.1. INTRODUCTION Nanotechnology is an emerging field focusing on the development of biomaterial design using simple biological building blocks. Molecular self-assembly is recognised as the process in which small molecules organise spontaneously into well-ordered nanostructures with specific functionality via reversible, non-covalent interactions including hydrogen bonding, disulphide bonds, van der Waals forces, electrostatic interactions, hydrophobic interactions and - stacking [1-3]. Peptide, as building blocks have served to be excellent building blocks for designing nanostructures that are highly relevant to tissue engineering, drug delivery systems, protein therapeutics and molecular bio-sensing
[4]

. On a molecular level, self-assembled nanostructures form stable


[1-2,4-7]

secondary structures; -sheets


16]

, -hairpins

[8-11]

, -helices and coiled-coils

[6, 12-13]

respectively. Non-natural peptide self-assemblies such as peptide amphiphiles (PAs) [14have been reported to form fibrous networks designed to mimic the dimensions of

the extra-cellular matrix (ECM). Aromatic peptides have also shown to undergo molecular self-assembly via - interactions to give rise to organised supramolecular nanostructures
[17-18]

. More specifically, peptide self-assembly resulted in the formation


[17-18]

of nanotubes (hollow cylindrical structures formed from ordered nanofibres)

Recently, several researchers have reported the use of another class of aromatic peptide, Fmoc protected di-peptides [4,19-23] which self-assembled to form fibrous hydrogels with anti-inflammatory and tuneable characteristics. The three-dimensional gel networks could be beneficial for different biomedical applications where the hydrogel can act as a carrier of drugs or other therapeutic agents or as a medium for encapsulating and maintaining viable cells and accumulating extra cellular matrix (ECM)[1-3,24-25]. Researchers are now focusing on constructing de novo
[25]

designs for tissue repair and

regeneration. Zhang and co-workers described the use of ionic-complementary peptides with alternating charged (hydrophobic and hydrophilic) amino acids to be used as peptide scaffolds to culture nerve cells and chondrocytes for tissue repair
[25-27]

Progressively more efforts were made by researchers to study different scaffolds, for example, Stupp and colleagues described the use of PAs scaffolds to support stem cell growth and differentiation, bone and cartilage regeneration, and therapeutic cell delivery
[28-31]

. Jayawarna et al. have used aromatic di-peptides which organised into well[21-23]

defined nanofibrous scaffolds to support the culture of chondrocytes and human dermal fibroblasts for cell culture applications in vitro . In all of the above examples,

hydrogels have been used as support matrices. The successes demonstrate that gels have considerable promise as scaffolds for in vitro and in vivo applications. Although a number of ionic-complementary peptide designs have been found to promote cell culture applications, Saiani and colleagues developed new self-assembled octapeptide systems FEFEFKFK and FEFKFEFK containing alternating charged and non-charged amino acid residues
[5-7]

. It was reported; gelation occurred by simply

mixing the peptides in distilled water at room temperature. The resultant gels consisted of -sheet conformation with fibre dimensions capable of mimicking the dimensions of ECM [6]. The current research will focus on testing these novel octapeptide systems for cell culture applications to support 2D and 3D cell culture in vitro. The first part of the thesis focuses on the synthesis and characterise self-assembled peptide gels under neutral physiological conditions and to compare and contrast in relation to alternating charge distribution of the two peptides on fibrous morphologies and mechanical properties at pH 7. Second part of the thesis enfolds the development of highly homogenous octapeptide gels for 2D and 3D culture of bovine chondrocytes. The stability of the two scaffolds in terms of cell morphology, viability and proliferation were compared respectively. Moreover, the mechanical properties in terms of ECM formation under cell culture conditions will be assessed. A preliminary study on the potential use of octapeptides gels as injectable biomaterials has also been introduced. The thesis is divided as follows; Chapter 1 and 2 describe the literature review based on the molecular self-assembly of different peptide systems which have been employed to promote cell culture and tissue engineering applications. The following chapters (3, 4, 5 and 6) comprehensively describe the research aim, results, discussion and conclusion of the findings obtained. Chapter 7 summarises the overall findings of the current research and suggestions for setting out the future research agenda.

1.2. REFERENCES 1) Zhang S., Marini D. M., Roger D. K., Hwang W., Supramolecular structure of helical ribbons self-assembled from a beta-sheet peptide. Journal of chemical physics 2003, Vol. 118, 389-397. 2) Yang Z., Gu H., Zhang Y., Wang L., Xu B., Small molecules hydrogels based on a class of anti-inflammatory agents. Chem Commun 2004, 208-209. 3) Langer R. Biomaterials in drug delivery and tissue engineering: one laboratorys experience. Acc. Chem. Res. 2000, Vol. 33, 94-101. 4) Robert J. Mart, Rachel D. Osborne, Molly Stevens and Rein V. Ulijn, Peptidebased stimuli-responsive biomaterials. Soft Matter 2006, Vol 2, 822-835. 5) Stephen Boothroyd, Alberto Saiani, Aline F. Miller, Formation of mixed ionic complementary peptide. Macromolecule. Symposium 2008; 27. 6) A. Saiani, A. Mohammed, H. Frielinghaus, R. Collins, N. Hodson, C.M. Kielty, M.J. Sherratt and A. F. Miller, Self-assembly and gelation properties of -helix versus -sheet forming peptides. Soft Matter 2009; 5: 193-202. 7) A.F. Miller and A. Saiani, Engineering Peptide Based Biomaterials: Structure, properties and applications. Chemistry Today Supplements Focus on Oligos & Peptides, 2010; 28: 34-38. 8) Ozbas, B., Kretsinger, J., Rajagopal, K., et al., Salt-triggered peptide folding and consequent self-assembly into hydrogels with tuneable modulus. Macromolecules. 2004; 37: 7331-7337. 9) L. Haines-Butterick, K. Rajagopal, M. Branco, D. Salick, R. Rughani, M. Pilarz, M. S. Lamm, D. J. Pochan and J. P. Schneider, P. Natl. Acad. Sci. USA 2007; 104: 7791-7796. 10) Juliana K. Kretsinger LAH, Bulent Ozbas, Darrin J. Pochan, Joel P. Schneider. Cytocompatibility of self-assembled -hairpin peptide hydrogel surfaces Biomaterials 2005: 26. 11) Monica C. Branco, Florian Nettesheim, Darrin J. Pochan, Joel P. Schneider, and Norman J. Wagner. Fast Dynamics of Semiflexible Chain Networks of Self-assembled peptides. Biomacromolecules 2009; 10: 1374 1380. 12) Ryadnov MG and Woolfson DN. Engineering the morphology of a selfassembling proten fibre. Nat. Mater. 2003; 2: 329- 332.

13) Derek N Woolfson and Maxim G Ryadnov. Peptide-based fibrous biomaterials: some things old, new and borrowed. Current Opinion in Chemical Biology 2006; 10: 559-567. 14) Jun H-W, Yuwono V, Paramonov SE, Hartgerink JD. Enzyme-mediated degradation of peptide-amphiphile nanofiber networks. Advanced Materials 2005; 17: 2612-2617. 15) Jun H-W, Paramonov SE, Hartgerink JD. Biomimetic Self-assembled Nanofibers. Soft Matter 2006; 2: 177-181. 16) Jeffrey D. Hartgerink, Elia Beniash, Samuel I. Stupp, Self-Assembly and Mineralization of Peptide-Amphiphile Nanofibers. Science 2001; 294: 16841687. 17) Reches M., Gazit E. Casting metal nanowires within discrete self-assembled peptide nanotubes. Science 2003; 300: 625-627. 18) Reches M., Gazit E. Formation of closed-cage nanostructures by self-assembly of aromatic di-peptides. American Chemical Society 2004; 4: 581-585. 19) Yang Z, Gu H, Zhang Y, Wang L, Xu B. Small molecule hydrogels based on a class of Antiinflammatory agents. Chem. Commun 2004: 208-209. (b) 20) Yang Z and Xu B. A simple visual assay based on small molecule hydrogels for detecting inhibitors of enzymes. Chem. Commun. 2004; 2424-2425. 21) V.Jayawarna, A. Smith, J.E. Gough and R.V Ulijn, Three-dimensional cell culture of chondrocytes on modified di-phenylalanine scaffolds. Biochemical society transactions 2007; 35: 535-537. 22) Vineetha Jayawarna, Murtza Ali, Thomas A. Jowitt, Aline F. Miller, Alberto Saiani, Julie E. Gough and Rein. V. Ulijn, Nano-structured Hydrogels for Three-Dimensional cell culture through selfassembly of

Fluorenylmethoxycarbonyl- Dipeptides. Adv Mater 2006; 18: 611-614. 23) Vineetha jayawarna, Stephen M. Richardson, Andrew R. Hirst, Nigel W. Hodson, Alberto Saiani, Julie E. Gough and Rein V. Ulijn. Introducing chemical functionality in Fmoc-peptide gels for cell culture. Actabiomaterialia 2009; 5: 934-943. 24) L. Lum and J. Elisseeff, Injectable hydrogels for cartilage Tissue engineering. Topics in Tissue Engineering 2003. 25) Kisiday J., Jin M., Kurz B., Hyng H., Semino C., Zhang S., Grodzinsky A. J. Self-assembling peptide hydrogel fosters chondrocytes extracellular matrix

production and cell division: Implications for cartilage tissue repair. PNAS. 2002; 99: 9996-10001. 26) Holmes T, Delacalle S, Su X, Rich A, Zhang S. Extensive neurite outgrowth and active neuronal synapses on peptide scaffolds Proc. Natl. Acad. Sci. USA 2000; 97:6728-6733. 27) Holmes TC. Novel peptide-based biomaterial scaffolds for tissue engineering. Trends in biotechnology 2002; 20: 16-21. 28) Timothy D. Sargeant, Mustafa O. Guler, Scott M. Oppenheimer, Alvaro Mata, Robert L. Satcher, David C. Dunand, Samuel I. Stupp, Hybrid bone implants: Self-assembly of peptide amphiphile nanofibres within porous titanium. Biomaterials 2008, Vol 29, 161171. 29) Ramille N. Shah, Nirav A. Shah, Marc M. Del Rosario Lim, Caleb Hsieh, Gordon Nuber and Samuel I. Stupp. PNAS 2010; 107: 3293-3298. 30) M. J. Webber, J. A. Kessler and S. I. Stupp. Emerging peptide nanomedicine to regenerate tissues and organs. Journal of Internal Medicine 2009; 267: 7188. 31) John B. Matson, R. Helen Zha, Samuel I. Stupp. Peptide self-assembly for crafting functional biological materials. Solid State and Materials Science 2011; 15: 225-235.

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