Professional Documents
Culture Documents
Populations
Specification
3.4.1 The dynamic equilibrium of populations is affected by a number of factors.
Candidates should be able to:
carry out experimental and investigative activities, including appropriate risk management
consider ethical issues when carrying out fieldwork, chiefly those relating to the organisms
involved and their environment
analyse and interpret data relating to the distribution of organisms, recognising correlations and
causal relationships
appreciate the tentative nature of conclusions that may be drawn from such data.
interpret growth curves, survival curves and age-population pyramids
Populations
calculate
population growth
rates from data on birth rate and death rate.
Investigating
Human
Variation in
and
relate changes in the size populations
and structure of human populations to different stages
in demographic
populations
population size
ecosystems
transition.
A critical
A population
Population size
appreciation of
Population size
is all the
and structure,
some of the ways in
may vary as a
organisms of
population
which the numbers
result of
one species in
growth rate,
and distribution of
a habitat.
age-population
organisms may be
Populations of
pyramids,
investigated.
different
Random sampling
the effect of
survival rates
species form
with quadrats and
abiotic factors
and life
a community.
counting along
expectancy.
transects to obtain
Within a
interactions
quantitative data.
habitat a
The use of
between
species
percentage cover
organisms:
occupies a
and
frequency
as
interspecific
niche
measures
of
and
governed by
abundance.
intraspecific
adaptation to
competition
The use of mark
both biotic
and predation.
releaserecapture
and abiotic
for more mobile
conditions.
species.
Definitions
Ecosystems
Factors to consider
when using
quadrates:
Random Sampling
Systematic sampling
along Transects
Measuring
Abundance
Mark-releaserecapture
Analysing data
Type of Trap
Method of Marking
Microchip
Electrofishing : Fish
Fur Removal
2.
1.
3.
Population Size
Population size
depends on limiting
factors:
Abiotic Factors
Mineral ions
Light
Temperature
Oxygen
Food
1.4 Competition
Intraspeci
fic
Competiti
on
Interspeci
fic
Competiti
on
Intraspecific Competition
Interspecific Competition
1.5 Predation
The relationship
between prey and
predator:
The fluctuations in
population as also due
to disease and climatic
factors not just
predation
Population crashes
create selection
pressure where
survival of the fittest
occurs, the survivors
will reproduce
War, disease and famine have only been temporary reversals in the upward
trend
Birth rate
Death rate
Immigration: Individuals join a new population
Emigration: Individuals leave a population
Population
Structure
Population
pyramids can be
used to plot
populations:
Survival Rates
Stable
Population
Increasing
Population
Decreasing
Specification
3.4.2 ATP provides the immediate source of energy for biological processes.
3.4.3 In photosynthesis, energy is transferred to ATP in the light-dependent reaction and the ATP
is utilised in the light-independent reaction.
Candidates should be able to explain how growers apply a knowledge of limiting factors in enhancing
temperature, carbon dioxide concentration and light intensity in commercial glasshouses. They should also be
able to evaluate such applications using appropriate data.
LightLightLimiting
dependent
ATP
independent
factors
reaction
reaction
The
synthesis of
ATP from
ADP and
phosphate
its role as
the
immediate
source of
energy for
biological
processes.
Photosynthes
is
The lightindependen
t and lightdependent
reactions in
a typical C3
plant.
light energy
excites
electrons in
chlorophyll
energy from
these excited
electrons
generates ATP
and reduced
NADP
the
production of
ATP involves
electron
transfer
associated with
the electron
transfer chain
in chloroplast
membranes
photolysis of
water produces
protons,
electrons and
oxygen.
carbon dioxide is
accepted by
ribulose
bisphosphate
(RuBP) to form two
molecules of
glycerate 3phosphate (GP)
ATP and reduced
NADP are required
for the reduction of
GP to triose
phosphate
RuBP is
regenerated in the
Calvin cycle
Triose phosphate
is converted to
useful organic
substances.
The principle
of limiting
factors as
applied to
the effects of
temperature,
carbon
dioxide
concentratio
n and light
intensity on
the rate of
photosynthes
is.
Definitions
Energy
Storing ATP
ATP has 3 phosphate groups which have unstable bonds thus a low activation
energy so are easily broken
Energy is released when the bonds break
The reaction uses water to is a hydrolysis reaction
ATP + HO ADP + Pi (inorganic phosphate) + E (Energy)
Synthesis of ATP
Adding an inorganic phosphate to ADP can form ATP again in a condensation
reaction. It occurs in 3 ways:
Photophosphorylation: In chlorophyll containing plant cells during
photosynthesis
Oxidative Phosphorylation: In the mitochondria of plants and animal cells during
electron transport
Substrate-level Phosphorylation: Plant and animal cells when phosphate groups
are transferred from donor molecules to ADP making ATP
In the first two ATP is synthesised using energy released during electron transfer
along an electron carrier chain
Roles of ATP
ATP is the immediate energy source as its energy store is not long
lasting due to the instability of the phosphate bonds
Cells dont store large quantities of ATP however ATP is rapidly re formed
from ADP and inorganic phosphate easily making it go further
ATP is better than glucose as it releases smaller more manageable
quantities of energy
The hydrolysis of ATP to ADP is a single reaction releasing energy
immediately whereas the process for glucose is much longer
ATP cannot be stored so is continuously made in the mitochondria, cells
such as muscle fibres contain large mitochondria due to the required
energy
ATP as a source of
energy
3.1 Photosynthesis
Leaf Structure
Photosynthesis Outline
Structure of
Chloroplast
ADP + P
e-
e-
PHOTOPHOSPHORYLATION
ATP
e-
e-
PHOTOLYSIS
ligh
t
2H2O
Chlorophy
ll
a
4H+ + e - +
O2
THE LIGHT-DEPENDENT
4NADP 4NADPH
REACTION
The Making of
ATP
Photolysis of
Water
Photolysis
Water molecules are
split using energy from
excited electrons in
chlorophyll a molecules.
Site of Light-Dependent
Reaction
Origin: Thylakoids of Chloroplast
Adaptations of Chloroplast:
Thylakoid membranes provide a large surface
area for chlorophyll attachment, electron
carriers and enzymes
Network of proteins in the grana hold the
chlorophyll in a precise manner for maximum
absorption of light
Granal membranes have enzymes for ATP
production
Contain both DNA and ribosomes so there is
Reduction of NADP
Electrons and Hydrogen ions
produced during photolysis
are used to reduce NADP to
Reduced NADP (NADPH).
Excited electrons and
hydrogen ions are
transferred to NADP.
NADP + H + + e- NADPH
NADPH can donate
electrons and hydrogen ions
to carbon dioxide and so is
a reducing agent.
The Stages
Photophosphorylation
Energy from the
excited electrons
is used to make
ATP.
A phosphate
group is added to
ADP.
ADP + P --energy from excited electrons ATP
Used to produce
NADPH
Photophosphorylation
ATP
Light Intensity
Carbon Dioxide
Temperature
occur
It is the slowest reaction that determines the overall rate
of photosynthesis
At any given moment, the rate of a physiological process
is limited by the factor that is at its least favourable
value
When light is the limiting factor photosynthesis is directly
proportional to light intensity
As light intensity increases the volume of oxygen
produced and carbon dioxide absorbed will increase till it
balances the oxygen absorbed and carbon dioxide
produced
This point is the compensation point due to no net
exchange of gases into or out of the plant
When increasing light intensity has no effect on rate of
there is another limiting factor
photosynthesis
0.1% CO will give the optimum concentration for
photosynthesis to occur
CO concentration affects enzyme activity especially the
enzyme that catalyses the combination of ribulose
bisphosphate and carbon dioxide in the light independent
reaction
From 0 to 25C the rate of photosynthesis doubles for
each 10C
25C is the optimum temperature and after this the rate
of photosynthesis declines due to enzymes becoming
denatured
Photosynthesis isn't purely photochemical as if it was it
wouldnt be affected by temperature
Reducing glycerate-3-phosphate
(GP)
NADPH and ATP from the lightdependent reaction are
required for this stage.
NADPH transfers electrons and
hydrogen ions to GP to form 2
molecules of Triose phosphate.
The energy for this is provided
by the ATP.
The NADPH has now been
oxidised back to NADP and can
be reused in the lightdependent reaction.
The ATP has lost energy and so
returns to ADP + P which can
also be reused in the lightindependent stage.
Regenerating RuBP
Of the 12 Triose
phosphates that are
produced, 10 will be
used to regenerate
RuBP.
Light Intensity
At low light intensities, the rate of
photosynthesis is directly proportional
to the light intensity.
Because as more light becomes
available, more chlorophyll molecules
can absorb light so more electrons are
excited leading to photolysis and
photophosphorylation.
More ATP and NADPH are produced so
the light-independent reactions can
occur at a higher rate so more product
is produced.
Eventually a maximum rate is reached
and so increasing light intensity has
no effect so the graph levels off.
This can be because all available
chlorophyll molecules are absorbing
light. Or some other factor is now the
limiting factor.
Temperature
When light is not a limiting factor (i.e.
high light intensities), increasing the
temperature increases the rate of
photosynthesis.
Above the optimum temperature, any
further increase causes the rate to
decrease rapidly.
Because the Calvin Cycle is enzyme
controlled, when the temperature
increases both enzymes and substrates
gain kinetic energy, so more collisions
occur, so more enzyme substrate
complexes form, so more product forms.
When the temperature exceeds the
optimum, the enzymes will denature and
the specific shape of the active site will
change and no longer be
complementary to the substrate so
fewer enzyme-substrate complexes can
form.
Carbon Dioxide
Concentration
At low CO2 levels an increase in
concentration causes a directly
proportional increase in the rate
of photosynthesis.
A maximum rate is eventually
reached and further increase has
no effect and so the graph levels
off.
This is because atmospheric CO2
levels are lower than the
optimum value so when
concentration is increased more
CO2 is absorbed so more product
is made.
Eventually, there is no more
RuBP available to absorb
anymore CO2 so there is no
further effect.
Factors to be Considered
For maximum yields to be achieved, limiting factors must be kept at an optimum
because the faster the plant photosynthesises the more carbohydrates it
produces which means the maximum yield will be achieved in the shortest time.
Carbon dioxide levels
High levels of CO 2 are the optimum however if the levels are too high over a long period of
time then the stomata will close resulting in a drop in the rate of photosynthesis. A
compromise level must therefore be used.
Temperature
An optimum temperature should be used to ensure that the plants photosynthesise rapidly
without any damage to cells.
Water
Need to be well watered to ensure the stomata remain open to absorb CO 2. However the
soil must not become waterlogged as it will reduce the uptake of mineral by active
transport. The plants must not become to wet either as this will promote fungal disease to
spread.
Light
Artificial lighting is used when natural light intensity falls. Specific wavelengths are chosen
so they are absorbed by the plants (i.e. red and blue).
Minerals
Soil must be supplemented with essential minerals. Potassium is particularly important in
stomatal mechanisms and so must be kept at an optimum.
Specification
3.4.4 In respiration, glycolysis takes place in the cytoplasm and
the remaining steps in the mitochondria. ATP synthesis is
associated with the electron transfer chain in the membranes of
mitochondria.
Aerobic Respiration
glycolysis takes place
in the cytoplasm and
involves the oxidation
of glucose to pyruvate
with a net gain of ATP
and reduced NAD
pyruvate combines
with coenzyme A in
the link reaction to
produce
acetylcoenzyme A
in a series of
oxidation-reduction
reactions the Krebs
cycle generates
reduced coenzymes
and ATP by
substrate-level
phosphorylation,
and carbon dioxide
is lost
Aerobic
Respiration Conc
acetylcoenzyme A is
effectively a two
carbon molecule that
combines with a four
carbon molecule to
produce a six carbon
molecule which
enters the Krebs
cycle
synthesis of ATP by
oxidative
phosphorylation is
associated with the
transfer of electrons
down the electron
transport chain and
passage of protons
across mitochondrial
membranes.
Anaerobic
respiration
Glycolysis
followed by the
production of
ethanol or
lactate and the
regeneration of
NAD in anaerobic
respiration.
Definitions
Glycolysis
Glycolysis is the initial stage in both aerobic and anaerobic respiration
Occurs in the cytoplasm of all living cells
A hexose sugar is split into 2 molecules of 3-carbon pyruvate
Activation of Glucose by phosphorylation: Glucose
is made more reactive by adding 2 phosphate
molecules, these come from the hydrolysis of 2 ATP
molecules to ADP. This provides energy to activate the
glucose as the activation energy has been lowered
Splitting of the Phosphorylated glucose: Each
glucose molecule is split into 2 3-carbon molecules
known as triose phosphate
It has four stages:
Oxidation of Triose Phosphate: Hydrogen is removed
from each triose phosphate molecule and transferred to
a hydrogen-carrier molecule (NAD) to form reduced NAD
Production of ATP: Enzyme controlled reactions
convert each triose phosphate into another 3-carbon
molecule called pyruvate, 2 molecules of ATP are
regenerated from ADP
2 molecules of ATP
2 molecules of reduced NAD
Energy Yield:
2 Molecules pyruvate
As glycolysis occurs in the cytoplasm of cells it doesnt require an organelle or
membrane for it to occur
It doesnt require oxygen and without oxygen pyruvate is converted to lactate or
ethanol by anaerobic respiration
Glycolysis
Glycolysis takes place in the
cytoplasm of the cell.
Glucose is first phosphorylated by 2
phosphate groups from 2 molecules
of ATP to produce 2 molecules of
glyceraldehyde-3-phosphate (GALP).
GALP is then oxidised and
dephosphorylated into pyruvate.
In this process, the phosphate groups
are transferred to ADP producing 2
molecules of ATP. A hydrogen is
transferred to a molecule of NAD
producing NADH.
1 x Glucose
2ATP
2ADP +
2P
2 x Glyceraldehyde
3-phosphate
4ADP +
4P
2NAD
4ATP
2 x Pyruvate
2NADH
Pyruvate undergoes a
series of reactions:
2 x Pyruvate
NAD
Decarboxylation
Carbon dioxide is removed which converts
the pyruvate into acetate.
NADH
Carbon
dioxide
Coenzyme
A
Acetyl
CoenzymeA
4 carbon dioxide
2FADH
6NADH
2ATP
ADP
NADH
ATP
FADH
NADH
Enzymes are attached to the cristae that are involved in the electron transport chain
Synthesis of ATP
Importance of
Oxygen
Only glycolysis is a source of ATP, for it to continue its products of pyruvate and
hydrogen must be constantly removed
The hydrogen must be released from the reduced NAD in order to regenerate NAD
as if it wasnt converted no NAD could take up the newly produced hydrogen from
glycolysis and it would stop
Production of
Ethanol
Production of
Lactate
Energy Yields
1x
Glucose
2ADP +
2P
2NAD
2ATP
2NADH
ANAEROBIC RESPIRATION
2x
Pyruvate
2NADH
2NAD
2 x Lactic
Acid
Anaerobic Respiration
When oxygen isnt available, the electron transport
chain cannot operate so the initial supply of NAD run
out.
To regenerate this, pyruvate produced during
glycolysis must be reduced.
Pyruvate is converted into lactic acid in animal cells.
Pyruvate + NADH Lactic Acid
The net yield from anaerobic respiration is simply the
2ATP produced in glycolysis and is therefore much
less energy efficient.
In some plants and microbes, pyruvate is converted
into ethanol.
Pyruvate + NADH Ethanol + Carbon Dioxide + NAD
Specification
3.4.6
Chemical
elements
are
recycled
in
ecosystems.
Microorganisms play a key role in recycling these elements.
Candidates should be able to analyse, interpret and evaluate data
relating to evidence of global warming and its effects on the yield of crop
plants, the life-cycles and numbers of insect pests, the distribution and
numbers of wild animals and plants.
Candidates should be able to analyse, interpret and evaluate data
Nutrient
relating to eutrophication.
Carbon
Nitrogen
cycles
The role of
microorganisms in
the carbon and
nitrogen cycles in
sufficient detail to
illustrate the
processes of
saprobiotic
nutrition,
ammonification,
nitrification,
nitrogen fixation
and denitrification.
The importance of
respiration,
photosynthesis and
human activity in
giving rise to shortterm fluctuation
and long-term
change in global
carbon dioxide
concentration.
The roles of carbon
dioxide and
methane in
enhancing the
greenhouse effect
and bringing about
global warming.
The environmental
issues arising from
the use of fertilisers.
Leaching and
eutrophication.
Definitions
Active Transport: Movement of a substance across a membrane from a
region of low concentration to high concentration using ATP
Aerobic: In the presence of oxygen
Anaerobic: Without oxygen
Biomass: Total mass of living material in a specific area at a given time,
usually measured as dry mass since water value is variable
Consumers: Organism that obtains energy by eating another
Decomposer: An organism, e.g. fungus that breaks down organic material.
Ecosystem: Unit in ecology made up of all interacting biotic and abiotic
factors in a specific area
Greenhouse Gas: Such as methane and carbon dioxide, they cause heat to
be trapped in the atmosphere raising the Earths temperature
Niches: All conditions and resources required for an organism to survive,
reproduce and maintain population
Oxidation: Chemical reaction causing the loss of electrons
Producers: Organism that synthesises organic molecules from simple
inorganic ones
Saprobiotic Microorganisms (Saprophyte): Organism that obtains food
taken up by
producers
(plants) as
simple
inorganic
molecules
The nutrients
are then
passed along
a food chain
Producers
incorporates
the nutrient
into complex
organic
molecules
The producer
is eaten and
nutrients
pass to the
consumers
Greenhouse
Gases
Global
Warming
Consequences of Global
Warming
Changes in temperature and precipitation, the timing of
seasons and frequency of extreme events e.g. storms
Climate change will effect niches available due to organisms
being adapted to particular niches
Animals could migrate to new areas causing competition and
loss of native species
Melting ice gap could cause extinction of wild plants and
animals e.g. polar bears and sea levels will rise
Low land would be flooded and sea water would extend further
up rivers making cultivation difficult
Droughts could occur due to higher temperatures meaning
xerophytes could only survive
Greater rainfall would occur in some areas
Insect lifecycles will be altered and due to them carrying
human and crop pathogens tropical diseases could spread
toward poles
Benefit could be more rainfall filling reservoirs, higher
temperatures causing higher rate of photosynthesis so more
productivity and a larger harvest
Nitrification
Nitrogen Fixation
Denitrification
When soil is waterlogged there is a shortage of oxygen and the type of microorganism
present changes
Fewer aerobic nitrifying and nitrogen fixing bacteria are found meaning more anaerobic
denitrifying bacteria are present
This bacteria converts soil nitrates into gaseous nitrogen reducing availability of nitrogen
containing compounds for plants
Fertilisers Increasing
Productivity
Plants require minerals for growth, nitrogen is needed
for proteins and DNA
Eutrophicat
ion
Specification
3.4.7 Ecosystems are dynamic systems usually moving from colonisation to
climax communities in the process of succession.
Candidates
Succession
should be able
to
use their
knowledge
and
Succession from
understanding to
pioneer species to
present scientific
climax community.
arguments and
At each stage in
ideas relating to
succession, certain
the conservation of
species may be
species and
recognised which
habitats
evaluate
change the
evidence and data
environment so that it
concerning issues
becomes more
relating to the
suitable for other
conservation of
species.
The changes in the
species and
abiotic environment
habitats and
result in a less hostile
consider conflicting
environment and
evidence
changing diversity.
explain how
conservation relies
Conservation of
on science to
habitats frequently
inform
decisioninvolves management
making.
of succession.
Definitions
Abiotic: An ecological factor that makes up part of the nonbiological environment of an organism e.g. temperature
7.1 Succession
Ecosystems constantly change, this is known as succession
The first stage of succession is the colonisation of an inhospitable environment by
the pioneer species
Pioneer Species
Adaptations:
Succession
Stages
Succession
Features:
Climax Communities
Have a stable equilibrium with the climate
Abiotic factors determine the dominate species in the community
Secondary Succession
If land has been cleared for agriculture or a forest fire the process
of succession still occurs
It is a faster process as spores and seeds remain alive in the soil
and there is an influx of animals and plants via migration
There is no need for a pioneer species
7.2 Conservation of
Habitats
Conservation involves active intervention from humans to maintain
biodiversity
Managing Succession